Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00493 ATGGCCGATTTGCTCCCTCTTTCCTCTGGTTCTATTCTCAGGACAAAAGGGGGTGAAGCAAAGGAAAGGCCTGCAAGACGCACCGATACCGCTGTGAAGAGTTGTCGCCACAACGCGCTGCACCTCCATTCTGGGTCTTTCCTATCTGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATTTGGATTGATGGAGGTACACCCGCTGCATCAGGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 831 0.42 MADLLPLSSGSILRTKGGEAKERPARRTDTAVKSCRHNALHLHSGSFLSGGRFASREKMSLLKNCRSFLSNFFFIPVGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASGQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00493 276 Coils Coil 100 127 - -
Arst4g00493 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 244 IPR027417 -
Arst4g00493 276 Pfam Helicase conserved C-terminal domain 142 242 IPR001650 -
Arst4g00493 276 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 136 276 IPR001650 -
Arst4g00493 276 CDD SF2_C_SNF 143 243 - -
Arst4g00493 276 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 119 244 - -
Arst4g00493 276 SMART helicmild6 159 242 IPR001650 -
Arst4g00493 276 Gene3D - 59 266 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00493 Arst-Chr4 3336671 3342110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00493 146 266 RAD5 or RAD16-like Gene Family AT1G02670 32.520 5.16e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00493 K14440 - adu:107482564 518.079