Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00491 ATGGCCGATTTGCTCCCTCTTTCCTCTGGTTCTATTCTCAGGACAAAAGGGGGTGAAGCAAAGGAAAGGCCTGCAAGACGCACCGATACCGCTGTGAAGAGTTGTCGCCACAACGCGCTGCACCTCCATTCTGGGTCTTTCCTATCTGAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATTTGGATTGATGGAGGTACACCCGCTGCATCAGGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTCTCATCAGTAAATATATACTAG 825 0.4279 MADLLPLSSGSILRTKGGEAKERPARRTDTAVKSCRHNALHLHSGSFLSEESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASGQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVSSVNIY 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00491 274 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 160 274 IPR001650 -
Arst4g00491 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 274 IPR027417 -
Arst4g00491 274 CDD SF2_C_SNF 167 274 - -
Arst4g00491 274 Coils Coil 124 151 - -
Arst4g00491 274 Gene3D - 94 274 IPR027417 -
Arst4g00491 274 Pfam Helicase conserved C-terminal domain 166 266 IPR001650 -
Arst4g00491 274 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 142 274 - -
Arst4g00491 274 SMART helicmild6 183 266 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00491 Arst-Chr4 3336660 3342111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00491 142 273 RAD5 or RAD16-like Gene Family AT1G05120 28.571 2.82e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00491 K14440 - adu:107482564 518.464