Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00473 ATGGATTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGTTCTTGCAGAACAGAAGATGCAAAGCAGGGATTTCCCAGGTGCTCGTAAATTTGCTCTCAGGGCTCAGCAGTTATTTCCTGATGTGGAGAACATTGCTCAGATGCTTGTTGTTTGTGATGTGCATTGCTCTGCAGAGCAAAAATTGTACGGTAATGAGATGAACTGGTATAAAATTCTTCAGATTGAGGTGACAGCTGATGAGGCCACAATTAAGAAACAGTACAGGAAGTTTGCTCTCCAACTTCATCCCGACAAAAACAAGTATGCTGGTGCAGAAGCAGCATTCAAGCTGATTGGGGAAGCACAACGAATCCTTTTGGATAGAGAAAAACGCTCGGAGCTTGACAGGAAGTGCAGGGTTGTAATGCACGGGCCTTCTATGGCACCTCATCATCAACAGAAGTTTCAGATGAATTATAATTCTGTAACACAAAACACTGTGAGGCCTAATTTTATGACCTTTAATCCTTGGCAGCAGCAACAACAGCCTTCTCAAACATCTCAACAGGGGATCAATGGTGACCGCGCTACCTTTTGGACTGCATGCTCATTTTGTTCGGTTAGATATGAGTATTATAGGGAAGTTTTGAATAGATCTCTTCGCTGCCAACATTGCAATAAGCCCTTTATTGCATATGATGTCGATGTTCAAGGTACAACCCCAGCAACTAATCTAAGTCAGCAAACTTTCACCCAGCGGACATATGGCCTCAATCATGGTGCCGTGAAGGTGGATTTTGGAGCTCAAGCTAATCTGCATACAAAGAAGTCCGATACAGAGTCTAGGGCAAACAAAGGCTCTACTTCTGATGTCTCCAAAAAGCCAAATGGAAAGAGGAGCAGGAAGCAGATGGTTGAATCCAGTGAAAGTTCTGATCCGTTTAGCAGTGATTCTGATGATATGTTTGCTAACGATGATGGTTTTACTGATTTGGAAAAGAATTCGGCTTCTAGAGAAGAGCATCCGCGGAGGTCTACACGGCAAAAGCATCAGGTTTCCTACAATGAGAATGCAAGTGATGACGACGATGATGAATCATTTGAGCCTTCAAGAATCAATACGGGGAATGGATCATCAAACCCTGCTAATGAAATGAATAATCAAAATGGTTTAGCCTCTGGTCTGAAAGATAATAAAAAAGGTGTAAAGCGAGACTCTGAAGAGGACTTGGTAAATAGAAATGCGAAAATTAAAGAAGTGAGGGGTGAAGAAGTAGTGGGAGATTCAAAAGTAGATGAAGCTTCAGAGAATGATGTCTATCCTGATCCAGAGTTTAGTGACTTTGACAAGGACAAGAAAGAGGATTCTTTTGCTGCTGGGCAGATTTGGGCTATTTATGATATGGCAGATGGCATGCCAAGATTTTATGCTTTGATAAAAAAAGTTATGTCTCCTGGGTTCAAGTTGCGGATAACATGGCTTGAACCAGCTCCAGATGACGATGATGAAATCAGCTGGTCGAATCAGGAATTGCCAATTGCATGTGGGAAGTATAAACTTGGTAGCAGTGACATCATTGAAGGCCATGAGACGTTCTCGCATGAGATTACTTGTGAAAAGGTTGGCCGGAGCTCTTTCAACGTGTACCCTAGAAAGGGAGAAACTTGGGCTCTTTTTAAAAACTGGGATATTAAATGGCATAAGGATGCAGAATCCCATCGGAAGTTTGATTTTGAGTTTGTGGAAATCTTGTCAAATTATGTTGAAGGTGACGGAGTATTTGTTGCATTATTGGGGAAGTTGAAAGGCTTTGTGAGTCTCTTCTTTCCTATTTTGAAGGACGGTAAGCCATTATTTCAAATACCATCAACACAGTTGTTCAGATTCTCTCACAGGGTTCCGTCTTTTCGGATGACTGGTCAGGAAGGAGTAGGTGTTCCTATGGGATCTTTAGAACTTGATCCTGTATCCTTGCCTATGAATCTGGATGAGATTGAACTTCCTGGAGAATTAATAGGGAAAAATAGTCAAAGTCCATCTGTTGGGACGAGTTCAAGGTCTTCAGATGCCTTAAAATTCTCCATGAAATCTGACACACATGCATCTACTTCTAAGATTAACTTGGAAGGTCAAAATTCAACACTAAGGACCAAGGCTCCTGTTGATCATATTGCTAATGGTAGTGCTCCTTCAGCTTCAGTGGCAGCAGCTATTCAAGTACCCAAACAGCAGTTCTTCAATTTTGATGAGGAGAGATCAAAGGTTGGCGTTGGTCAGGTTTGGGCAAGTTATGGTGGACAGGATGGAGCACCAAGATACTGCTGTTAA 2307 0.4213 MDCNKEEALRAKVLAEQKMQSRDFPGARKFALRAQQLFPDVENIAQMLVVCDVHCSAEQKLYGNEMNWYKILQIEVTADEATIKKQYRKFALQLHPDKNKYAGAEAAFKLIGEAQRILLDREKRSELDRKCRVVMHGPSMAPHHQQKFQMNYNSVTQNTVRPNFMTFNPWQQQQQPSQTSQQGINGDRATFWTACSFCSVRYEYYREVLNRSLRCQHCNKPFIAYDVDVQGTTPATNLSQQTFTQRTYGLNHGAVKVDFGAQANLHTKKSDTESRANKGSTSDVSKKPNGKRSRKQMVESSESSDPFSSDSDDMFANDDGFTDLEKNSASREEHPRRSTRQKHQVSYNENASDDDDDESFEPSRINTGNGSSNPANEMNNQNGLASGLKDNKKGVKRDSEEDLVNRNAKIKEVRGEEVVGDSKVDEASENDVYPDPEFSDFDKDKKEDSFAAGQIWAIYDMADGMPRFYALIKKVMSPGFKLRITWLEPAPDDDDEISWSNQELPIACGKYKLGSSDIIEGHETFSHEITCEKVGRSSFNVYPRKGETWALFKNWDIKWHKDAESHRKFDFEFVEILSNYVEGDGVFVALLGKLKGFVSLFFPILKDGKPLFQIPSTQLFRFSHRVPSFRMTGQEGVGVPMGSLELDPVSLPMNLDEIELPGELIGKNSQSPSVGTSSRSSDALKFSMKSDTHASTSKINLEGQNSTLRTKAPVDHIANGSAPSASVAAAIQVPKQQFFNFDEERSKVGVGQVWASYGGQDGAPRYCC 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00473 768 MobiDBLite consensus disorder prediction 689 708 - -
Arst4g00473 768 SMART dnaj_3 66 123 IPR001623 -
Arst4g00473 768 MobiDBLite consensus disorder prediction 266 403 - -
Arst4g00473 768 Gene3D DnaJ domain 64 184 IPR036869 -
Arst4g00473 768 MobiDBLite consensus disorder prediction 324 350 - -
Arst4g00473 768 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Arst4g00473 768 PRINTS DnaJ domain signature 87 102 IPR001623 -
Arst4g00473 768 PRINTS DnaJ domain signature 103 123 IPR001623 -
Arst4g00473 768 PRINTS DnaJ domain signature 69 87 IPR001623 -
Arst4g00473 768 MobiDBLite consensus disorder prediction 285 299 - -
Arst4g00473 768 Pfam Domain of unknown function (DUF3444) 432 635 IPR024593 -
Arst4g00473 768 CDD DnaJ 67 120 IPR001623 -
Arst4g00473 768 Pfam DnaJ domain 67 128 IPR001623 -
Arst4g00473 768 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 768 - -
Arst4g00473 768 MobiDBLite consensus disorder prediction 415 444 - -
Arst4g00473 768 MobiDBLite consensus disorder prediction 363 387 - -
Arst4g00473 768 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00473 Arst-Chr4 3195264 3198540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00473 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.751 4.51e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00473 - - ahf:112741095 952.97