Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00472 ATGGATTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGTTCTTGCAGAACAGAAGATGCAAAGCAGGGATTTCCCAGGTGCTCGTAAATTTGCTCTCAGGGCTCAGCAGTTATTTCCTGATGTGGAGAACATTGCTCAGATGCTTGTTGTTTGTGATGTGCATTGCTCTGCAGAGCAAAAATTGTACGGTAATGAGATGAACTGGTATAAAATTCTTCAGATTGAGGTGACAGCTGATGAGGCCACAATTAAGAAACAGTACAGGAAGTTTGCTCTCCAACTTCATCCCGACAAAAACAAGTATGCTGGTGCAGAAGCAGCATTCAAGCTGATTGGGGAAGCACAACGAATCCTTTTGGATAGAGAAAAACGCTCGGAGCTTGACAGGAAGTGCAGGGTTGTAATGCACGGGCCTTCTATGGCACCTCATCATCAACAGAAGTTTCAGATGAATTATAATTCTGTAACACAAAACACTGTGAGGCCTAATTTTATGACCTTTAATCCTTGGCAGCAGCAACAACAGCCTTCTCAAACATCTCAACAGGGGATCAATGGTGACCGCGCTACCTTTTGGACTGCATGCTCATTTTGTTCGGTTAGATATGAGTATTATAGGGAAGTTTTGAATAGATCTCTTCGCTGCCAACATTGCAATAAGCCCTTTATTGCATATGATGTCGATGTTCAAGGTACAACCCCAGCAACTAATCTAAGTCAGCAAACTTTCACCCAGCGGACATATGGCCTCAATCATGGTGCCGTGAAGGTGGATTTTGGAGCTCAAGCTAATCTGCATACAAAGAAGTCCGATACAGAGTCTAGGGCAAACAAAGGCTCTACTTCTGATGTCTCCAAAAAGCCAAATGGAAAGAGGAGCAGGAAGCAGATGGTTGAATCCAGTGAAAGTTCTGATCCGTTTAGCAGTGATTCTGATGATATGTTTGCTAACGATGATGGTTTTACTGATTTGGAAAAGAATTCGGCTTCTAGAGAAGAGCATCCGCGGAGGTCTACACGGCAAAAGCATCAGGTTTCCTACAATGAGAATGCAAGTGATGACGACGATGATGAATCATTTGAGCCTTCAAGAATCAATACGGGGAATGGATCATCAAACCCTGCTAATGAAATGAATAATCAAAATGGTTTAGCCTCTGGTCTGAAAGATAATAAAAAAGGTGTAAAGCGAGACTCTGAAGAGGACTTGGTAAATAGAAATGCGAAAATTAAAGAAGTGAGGGGTGAAGAAGTAGTGGGAGATTCAAAAGTAGATGAAGCTTCAGAGAATGATGTCTATCCTGATCCAGAGTTTAGTGACTTTGACAAGGACAAGAAAGAGGATTCTTTTGCTGCTGGGCAGATTTGGGCTATTTATGATATGGCAGATGGCATGCCAAGATTTTATGCTTTGATAAAAAAAGTTATGTCTCCTGGGTTCAAGTTGCGGATAACATGGCTTGAACCAGCTCCAGATGACGATGATGAAATCAGCTGGTCGAATCAGGAATTGCCAATTGCATGTGGGAAGTATAAACTTGGTAGCAGTGACATCATTGAAGGCCATGAGACGTTCTCGCATGAGATTACTTGTGAAAAGGTTGGCCGGAGCTCTTTCAACGTGTACCCTAGAAAGGGAGAAACTTGGGCTCTTTTTAAAAACTGGGATATTAAATGGCATAAGGATGCAGAATCCCATCGGAAGTTTGATTTTGAGTTTGTGGAAATCTTGTCAAATTATGTTGAAGGTGACGGAGTATTTGTTGCATTATTGGGGAAGTTGAAAGGCTTTGTGAGTCTCTTCTTTCCTATTTTGAAGGACGGTAAGCCATTATTTCAAATACCATCAACACAGTTGTTCAGATTCTCTCACAGGGTTCCGTCTTTTCGGATGACTGGTCAGGAAGGAGTAGGTGTTCCTATGGGATCTTTAGAACTTGATCCTGTATCCTTGCCTATGAATCTGGATGAGATTGAACTTCCTGGAGAATTAATAGGGAAAAATAGTCAAAGTCCATCTGTTGGGACGAGTTCAAGGTCTTCAGATGCCTTAAAATTCTCCATGAAATCTGACACACATGCATCTACTTCTAAGATTAACTTGGAAGGTCAAAATTCAACACTAAGGACCAAGGCTCCTGTTGATCATATTGCTAATGGTAGTGCTCCTTCAGCTTCAGTGGCAGCAGCTATTCAAGTACCCAAACAGCAGTTCTTCAATTTTGATGAGGAGAGATCAAAGGTTGGCGTTGGTCAGGTTTGGGCAAGTTATGGTGGACAGGATGGAGCACCAAGGTATTATGGTTTGATTATATTGATTAAGCCTAGCCCAGATTTTGAGGTGCATGTTTTGAATCTTACTAATTGCTGGATACCAGATACTGCTGTTAAATGGGATGACAAGAAAATGATCGTTCCTTGCGGACGATTTCGGGTTATACAAAGTCCTGTTGTCTCTATTCTTAAGGACACAAATTCTTTTTCACATCAGCTGCATCCTGTTACTGATGGTAATGGCAGGGATAAGGAGTTCATAATATTCCCAAGGAAAGGTCAAGTTTGGGCATTGTATAGGAAATGGACAACTAAAATCAGGCGAGCCGATTTGTTAAAGATGGAGTATGATATAGTGGAAGTTGTTGAAGAAGATAATAATAGTTTGGGGATAGAGGTGTTGCCTTTGGAGAAGGTGAGTGGTTATCATTCAGTCTTCAAGGGCAAATCAAATGGGAGATCACCTGCAACCCAGAGAATACCCAGCAGAAAATTGCTCATGTTCTCCCACCAAATCCCAGCATTCAGACTCACAGAAAAACATGGCAATCTGAAAGGTTTCCTCGAAATTAGTCCGCGAGCTCTGCCGGCTAATTATTTAACCGATAGATGA 2886 0.4182 MDCNKEEALRAKVLAEQKMQSRDFPGARKFALRAQQLFPDVENIAQMLVVCDVHCSAEQKLYGNEMNWYKILQIEVTADEATIKKQYRKFALQLHPDKNKYAGAEAAFKLIGEAQRILLDREKRSELDRKCRVVMHGPSMAPHHQQKFQMNYNSVTQNTVRPNFMTFNPWQQQQQPSQTSQQGINGDRATFWTACSFCSVRYEYYREVLNRSLRCQHCNKPFIAYDVDVQGTTPATNLSQQTFTQRTYGLNHGAVKVDFGAQANLHTKKSDTESRANKGSTSDVSKKPNGKRSRKQMVESSESSDPFSSDSDDMFANDDGFTDLEKNSASREEHPRRSTRQKHQVSYNENASDDDDDESFEPSRINTGNGSSNPANEMNNQNGLASGLKDNKKGVKRDSEEDLVNRNAKIKEVRGEEVVGDSKVDEASENDVYPDPEFSDFDKDKKEDSFAAGQIWAIYDMADGMPRFYALIKKVMSPGFKLRITWLEPAPDDDDEISWSNQELPIACGKYKLGSSDIIEGHETFSHEITCEKVGRSSFNVYPRKGETWALFKNWDIKWHKDAESHRKFDFEFVEILSNYVEGDGVFVALLGKLKGFVSLFFPILKDGKPLFQIPSTQLFRFSHRVPSFRMTGQEGVGVPMGSLELDPVSLPMNLDEIELPGELIGKNSQSPSVGTSSRSSDALKFSMKSDTHASTSKINLEGQNSTLRTKAPVDHIANGSAPSASVAAAIQVPKQQFFNFDEERSKVGVGQVWASYGGQDGAPRYYGLIILIKPSPDFEVHVLNLTNCWIPDTAVKWDDKKMIVPCGRFRVIQSPVVSILKDTNSFSHQLHPVTDGNGRDKEFIIFPRKGQVWALYRKWTTKIRRADLLKMEYDIVEVVEEDNNSLGIEVLPLEKVSGYHSVFKGKSNGRSPATQRIPSRKLLMFSHQIPAFRLTEKHGNLKGFLEISPRALPANYLTDR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00472 961 SMART dnaj_3 66 123 IPR001623 -
Arst4g00472 961 Gene3D DnaJ domain 64 183 IPR036869 -
Arst4g00472 961 MobiDBLite consensus disorder prediction 266 403 - -
Arst4g00472 961 Pfam DnaJ domain 67 128 IPR001623 -
Arst4g00472 961 MobiDBLite consensus disorder prediction 324 350 - -
Arst4g00472 961 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Arst4g00472 961 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Arst4g00472 961 MobiDBLite consensus disorder prediction 285 299 - -
Arst4g00472 961 PRINTS DnaJ domain signature 87 102 IPR001623 -
Arst4g00472 961 PRINTS DnaJ domain signature 103 123 IPR001623 -
Arst4g00472 961 PRINTS DnaJ domain signature 69 87 IPR001623 -
Arst4g00472 961 CDD DnaJ 67 120 IPR001623 -
Arst4g00472 961 MobiDBLite consensus disorder prediction 415 444 - -
Arst4g00472 961 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 690 - -
Arst4g00472 961 MobiDBLite consensus disorder prediction 363 387 - -
Arst4g00472 961 Pfam Domain of unknown function (DUF3444) 432 635 IPR024593 -
Arst4g00472 961 Pfam Domain of unknown function (DUF3444) 730 938 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00472 Arst-Chr4 3194521 3198540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00472 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.751 8.22e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00472 - - ahf:112741095 1176.77