Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00403 ATGTTGATTTTCTTTCCGCTTCACTCGAGTGTAGGATCCAACATTTTCAGCCTTCACTTCCCATGCATCAATAGGATTAGGGTTTTCAGATATATGGGTTGCATATGCTTCAAAGGGAAATCTGCAGAGGAATACGTTGCAGAGAACCGCATAAGAAGGGGCAAGTCCAAGGCGTTGAAATCAAAGCTTGCGAGTAATTCTCTTCCCCTCATAGACGTTGGGAATGATGCCGTCCAAGGGGAGAACGAAGAGGTTCAGGTGGCTGTGGCACCCACGGTGTTCAGTGTGACCAACGGGGAGCGAGGAGCTCTGGTTATCGCTGGATGGCCCTCTTGGCTCGCTGCCGTTGCTGGGGAAGCCATTAATGGGTGGATTCCACGTAGAGCTGACTCCTTTGAGAAGTTCGATAAGATTGGACAAGGAACTTATAGTAGTGTTTATAGAGCTCGTGATCTTGAAACAAATAAAATTGTTGCATTAAAGAAGGTTCGATTTGCTACTATGGATCCAGAAAGTGTTCGCTTTATGGCAAGGGAAATTCTTTTGCTGCGAAGGCTTGATCATCCAAATGTCATGAAGCTAGAAGGCATGATTACTTCCAGGGTTTCTGGTAGCTTGTACCTTATTTTTGACTATATGGAACATGATCTTGCAGGGCTTGCAGCAATACCTGGCATCAAGTTTTCTGAAGCACAGCCATCTAAGGGGAAGCCTTTAACAAGTCGTGTTGTAACCTTGTGGTACCGACCGCCTGAACTTTTACTCGGAGCTACAGATTATGGAGTTTCTGTGGACTTATGGAGTTCTGGTTGTATTCTTGCTGAATTGTTTTCTGGAAAGGCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCATAAAATTTTCAAACTTTGTGGGTCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGCTGCGAAATGCAACAATTTTCAAACCTCAACAACCATACAAACGGGTTGTTTCTGAGACATTCAAGAATTTTCCTTCATCTGCACTGGGCCTATTGGAGGTACTTCTTGCTACAGAACCTGAAGATCGAGGAACAGCATCTTTAGCACTTCAAAATGAGTTCTTTACCACAGAGCCACTTCCATGTGATCCATCAACTTTGCCAAATTATCCACCGAGTAAGGAGTTTGATGTCAAACTTCAACAAGAGGAAGCTAGAAGGAGAGAGAGATCAACAAATAAAGAGCGTGAACAAGGATCAGTTAGGAGGAAGTTAAAAGAGTCTAAAAATGTTCTAGCTCCTGATGCTAATGCTGAATTGCAAGCATCAATAGAGAAGCGACAAAGGCAACCTAATTCAAAATCCATTGTTGAAAGCTACAATCCTAAAGAGGATGGCAACTCTGGCTTCCCTCTTGGACTTGCAAAGCCAAGAGTTCTCAGTGTCTTCTCTCATTCCGGCCAGTCAATGCATCCAAGTGCATATGGTTCCTCAAACAATATGAATTTGAAAGAGGAAAATGTTCTTATTGGCTTCAATCATGACTTTGGATCAAGGCACACTGAATTGAGTAAACAAAAATTTCGTTGGCTTGATGGCACACAATTGTCCAAATTTTCTGGTTCATTTGCAGTTCGAGGTGATGGCAATTCGAATGATTTGCTGGATGGACTGAAATTGCACCAAAAGGACTTCAATCCTTTTGAAAAGGATCTTACCATGGGTTATGCTTCCAAAAACAAACGCTTCCACTATTCTGGACCATTGTTGTCACAGGGGGGGGGGAACATTGAAGACATGCTCAAGGAGCACGAAAGACAAATCCAACAGGCTGCCCGCAAAGGTCGTTTGGAAAAGGACAACACAAAAAAGGCTAAGAAGGAGAATGGCCTAACCGAATCACTACTATAG 1884 0.4321 MLIFFPLHSSVGSNIFSLHFPCINRIRVFRYMGCICFKGKSAEEYVAENRIRRGKSKALKSKLASNSLPLIDVGNDAVQGENEEVQVAVAPTVFSVTNGERGALVIAGWPSWLAAVAGEAINGWIPRRADSFEKFDKIGQGTYSSVYRARDLETNKIVALKKVRFATMDPESVRFMAREILLLRRLDHPNVMKLEGMITSRVSGSLYLIFDYMEHDLAGLAAIPGIKFSEAQPSKGKPLTSRVVTLWYRPPELLLGATDYGVSVDLWSSGCILAELFSGKAIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLRNATIFKPQQPYKRVVSETFKNFPSSALGLLEVLLATEPEDRGTASLALQNEFFTTEPLPCDPSTLPNYPPSKEFDVKLQQEEARRRERSTNKEREQGSVRRKLKESKNVLAPDANAELQASIEKRQRQPNSKSIVESYNPKEDGNSGFPLGLAKPRVLSVFSHSGQSMHPSAYGSSNNMNLKEENVLIGFNHDFGSRHTELSKQKFRWLDGTQLSKFSGSFAVRGDGNSNDLLDGLKLHQKDFNPFEKDLTMGYASKNKRFHYSGPLLSQGGGNIEDMLKEHERQIQQAARKGRLEKDNTKKAKKENGLTESLL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00403 627 SMART serkin_6 132 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00403 627 Gene3D Transferase(Phosphotransferase) domain 1 222 406 - -
Arst4g00403 627 MobiDBLite consensus disorder prediction 598 621 - -
Arst4g00403 627 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Arst4g00403 627 Gene3D Phosphorylase Kinase; domain 1 127 221 - -
Arst4g00403 627 SUPERFAMILY Protein kinase-like (PK-like) 125 374 IPR011009 -
Arst4g00403 627 MobiDBLite consensus disorder prediction 388 421 - -
Arst4g00403 627 MobiDBLite consensus disorder prediction 598 627 - -
Arst4g00403 627 FunFam probable serine/threonine-protein kinase At1g54610 119 214 - -
Arst4g00403 627 ProSiteProfiles Protein kinase domain profile. 132 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00403 627 Coils Coil 585 612 - -
Arst4g00403 627 MobiDBLite consensus disorder prediction 370 458 - -
Arst4g00403 627 PANTHER CELL DIVISION PROTEIN KINASE 130 222 - -
Arst4g00403 627 Pfam Protein kinase domain 132 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00403 627 Pfam Protein kinase domain 235 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00403 627 MobiDBLite consensus disorder prediction 434 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00403 Arst-Chr4 2984312 2989417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00403 124 409 Core Cell Cycle Gene Families AT5G10270 40.113 9.74e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Arst4g00403 Pkinase 4.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00403 - - aip:107638508 1108.98