Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00394 ATGGCGGGAGAAGGAGGCGATGTTAGCGTTGCCAACGGCGCTGATGAAACAGCAAACCCGGAATCCGCAGCCTCCTCTCCAAAGAGCAAGGTCAAGTTCATGTGCAGCCATGGTGGCAAGGTTCTTCCCCGTCCCTCCGATGGCCTCCTCAAGTACGTCGGCGGCGAGACTCGCGTCGTTTCTGTCCCTAGGAACGTCACTTTCCACGAGTTGATGAAGAAGCTGCATGGAATGATCGAAGGAGGAGAAAGCATGGTGCTAAAGTATCAGCTGGTGCCGGAAGATCTGGACACACTGGTATCGGTGAGGAACGACGAGGATCTAAAGCATATGATTGACGAGCATGACCGTCACGAAGTTGGAGGAGCTCCCATGCTGCGGACATTCATGTGCCCGTCGAAGCCGCTTTTGGTGGTGGACAAAGATAACCAAGGAACATCAGGGACTGAGCCCTACCCCTTGGAGCAGCGCTACATTGATGCCATTAACGGCTTCCAGCGCATAAGCCCAAGGTCAAGGCCTAGTCCAATTAGGGCTGCATTCAACGCCCCCTCTGCCTGTTCATCCCCCAAATCCAACTCCCCAGACGGTCACACCACGGATCTGGTCCACGAATCGCCGCCCTTCCACGGCCACATTCTCGGTCTCGGTCTAGGCCGCCGTAGCACCATGCATAGAGTGCACAGCTCTCCCAGCATTTCTAGCCTAAGCAACATTCACAGCCTTGCCGTTCAACAGCATGAACACCATAACCATTATCACAATCATTCCCCGAGCCACCAGAGTCAGAACCAGGGCCAGAGCCAGGGTCAGGGCCAGAACCAAGGCCACCATCCTCCTGCTCATCTGCCTGCTTCTTATCAAAGAACCGCGACACAAGATCAATTAGTTGGGATGGGAAGGCCGCCGCCGCTTTTGGCGCTGAGGAGGTCGGATATGGGTAGCAGGAGTGCAAATAGTAGTAGTAGTACTTTCAACTATTATTATCCGCCTACTAATAATAATAATTGCAGACCCCCAAAAGGGTACGGATACTACGATGAATCTCCAGCATACGGTGGTGGCATGGGTGAAAGAGTTGGTAGTGTGCCTCAGAGTCCTAGAAACTCTATATGGGAATAA 1122 0.533 MAGEGGDVSVANGADETANPESAASSPKSKVKFMCSHGGKVLPRPSDGLLKYVGGETRVVSVPRNVTFHELMKKLHGMIEGGESMVLKYQLVPEDLDTLVSVRNDEDLKHMIDEHDRHEVGGAPMLRTFMCPSKPLLVVDKDNQGTSGTEPYPLEQRYIDAINGFQRISPRSRPSPIRAAFNAPSACSSPKSNSPDGHTTDLVHESPPFHGHILGLGLGRRSTMHRVHSSPSISSLSNIHSLAVQQHEHHNHYHNHSPSHQSQNQGQSQGQGQNQGHHPPAHLPASYQRTATQDQLVGMGRPPPLLALRRSDMGSRSANSSSSTFNYYYPPTNNNNCRPPKGYGYYDESPAYGGGMGERVGSVPQSPRNSIWE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00394 373 Gene3D - 51 131 - -
Arst4g00394 373 PANTHER OS05G0427100 PROTEIN-RELATED 20 299 - -
Arst4g00394 373 SUPERFAMILY CAD & PB1 domains 47 136 - -
Arst4g00394 373 SMART PB1_new 45 133 IPR000270 GO:0005515
Arst4g00394 373 MobiDBLite consensus disorder prediction 257 276 - -
Arst4g00394 373 Pfam PB1 domain 50 118 IPR000270 GO:0005515
Arst4g00394 373 MobiDBLite consensus disorder prediction 313 339 - -
Arst4g00394 373 MobiDBLite consensus disorder prediction 296 373 - -
Arst4g00394 373 MobiDBLite consensus disorder prediction 167 208 - -
Arst4g00394 373 MobiDBLite consensus disorder prediction 246 284 - -
Arst4g00394 373 CDD PB1_UP2 34 129 - -
Arst4g00394 373 MobiDBLite consensus disorder prediction 1 30 - -
Arst4g00394 373 MobiDBLite consensus disorder prediction 185 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00394 Arst-Chr4 2933830 2935459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00394 30 165 MAP Kinase Kinase Kinase AT5G57610 46.479 5.67e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00394 - - aip:107638505 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00394 4 2933830 2935459 Arst4g00394 4 2933830 2935459 ECH