Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00372 ATGGAAGTATCAGATTTGCAAAACAAGAAGAAGAAGCAGCAGAGCGGCAACAACAACAACAATAACAGCAACCTTGTGGTCCCCTTTGATGGAGCCACCACCGCCACCGGAAGGCCCTTCATCATGGGGGGGTCCATGTCTTCTTCAACTTCGTCGTCTTCTTCTTCATCCAATTCAACTTCTTCTTCCACCACCATCGACGCCAACCTCGCCATCGCCACCAGATCTGACGACAACCAGCTCCAGACTGCACCCAAGAGGTCCACCAAGGACAGGCATACAAAGGTCGACGGTCGAGGCCGCAGAATCCGAATGCCCGCCACATGCGCCGCTAGGGTTTTCCAGTTGACCAGAGAATTGGGACACAAGTCAGACGGAGAGACCATCGAGTGGCTTCTCCAGCAGGCTGAGCCTGCTATCATCGCCGCCACCGGCACCGGCACCATCCCCGCTAATTTCTCCACCCTCAACGTCTCTCTAAGAAGCAGCGGCTCCACGCTCTCCGCTCCGCCGTCCAAGTCCGCACCTCACACTTTCCACGCTGCAGCGTTGGCACTCGCTCACCACCATCCTTCTTACGAGGAAGCGTTTCACCAGCACACGGCGTTGCTAGGGTTTCACCCTCACCACGCGCAGCACCAGCACCTTATGACTGCTGACCAAATCGCAGAAGCGCTTCCCGGCGGCGCCGCCGACTCCAGCGAGAACTATATGAGGAAACGCTTCAGAGAAGACCTGTTCAAAGATGAGAGCAATCATCCGTCGGAGTCGCAGAACAATGAAAGTGGTGGTGCAGGTGCAGCTGCTGCCGATGGTTCTTCGCCAAAGCCGTTCAAAACCAACCTACAAATGCAGCTGCAACAACAGCAACCTCAACCAGAAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTTCTTCTGGACATGGACTTCTTCGCCAATCCAATTTGGTACCTGCCACTGCCATGTGGGCGGTAGCGCCCGCACCCGCCACCGCCGGTGCACCAGGCAGCACAATCTGGATGCTTCCAGTGACTGCTGGAGGTGCAGGTGGTGTGGCCACCGGTGCTGCAGCCTCGGAGGCGCAGATGTGGCCGTTTGCTCATCAGGGTGGCGGTGGCGGCGGCGGCGGCGGCGGCGGTGGTAACAACACGTTGCAAGGCCCACTACACTTGATGCCGAGGTTCAACCTTTCCCCCAGTGGCGGCGTTGAATTCCAGCAAGAGGGACGCGGTGGGCTTCAGCTGGGTTCGATGGTAATGCCGGCGGCGCAGCAACAGCAGCAGCCGCCGTCTCAGCATCTTGGATTAACGATGTCAGAATCAAACTTGGGAATGCTGGCTGCTTTGAATGCTTACACAAGAGCTGGTTTGAACATGAACATGAATATGAACATCAATTCTTCTTCTTCTCATCATCATCATCATCAACATCAGCCTCCTCCTCCTCCTCAGGCTGCAGACAGCGGGGAAGATGGTCCTAACAGCTCCCAATGA 1494 0.5669 MEVSDLQNKKKKQQSGNNNNNNSNLVVPFDGATTATGRPFIMGGSMSSSTSSSSSSSNSTSSSTTIDANLAIATRSDDNQLQTAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHAAALALAHHHPSYEEAFHQHTALLGFHPHHAQHQHLMTADQIAEALPGGAADSSENYMRKRFREDLFKDESNHPSESQNNESGGAGAAAADGSSPKPFKTNLQMQLQQQQPQPEGGGGGGGGGGSSGHGLLRQSNLVPATAMWAVAPAPATAGAPGSTIWMLPVTAGGAGGVATGAAASEAQMWPFAHQGGGGGGGGGGGGNNTLQGPLHLMPRFNLSPSGGVEFQQEGRGGLQLGSMVMPAAQQQQQPPSQHLGLTMSESNLGMLAALNAYTRAGLNMNMNMNINSSSSHHHHHQHQPPPPPQAADSGEDGPNSSQ 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00372 497 ProSiteProfiles TCP domain profile. 89 143 IPR017887 -
Arst4g00372 497 MobiDBLite consensus disorder prediction 84 102 - -
Arst4g00372 497 MobiDBLite consensus disorder prediction 40 83 - -
Arst4g00372 497 Pfam TCP family transcription factor 88 205 IPR017887 -
Arst4g00372 497 MobiDBLite consensus disorder prediction 10 30 - -
Arst4g00372 497 MobiDBLite consensus disorder prediction 250 311 - -
Arst4g00372 497 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 446 IPR005333 GO:0003700
Arst4g00372 497 MobiDBLite consensus disorder prediction 1 103 - -
Arst4g00372 497 MobiDBLite consensus disorder prediction 276 294 - -
Arst4g00372 497 MobiDBLite consensus disorder prediction 462 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00372 Arst-Chr4 2797824 2800096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00372 86 366 TCP Transcription Factor Family AT1G35560 48.084 2.32e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst4g00372 TCP 3.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00372 - - adu:107482753 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00372 4 2797824 2800096 Arst4g00372 4 2797824 2800096 ECH