Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00365 ATGTTTATGCTTATAATAATCTTACTCTTCGCTACTCGGTTGTCATATTTACGATACGAATTTGATGAATACGTTATTGCAGTGACCAGGTTTGATTGGGAACTGTTTGTTGCTTTGCGTCTGCATCAGCTTATGGAGAATCGATTCAGAATTATTAGAGAATCTGATCTCTTAATGATGGATAATGCAGCTTCAGAAGCAGTTTTCTTACATGGCGACTTGGATCTCTGGATTCTTGAGGCAAAAGCTCTCCCGAATTTGGATCTTTCCACGGAGACTATGCGAAAATGCATTACCATGGGCAACAGCTGTTCCCCTCCCTTCGTGAAAGGGCTCAAGACACAGTCAGGGAGACACAAAATGATTACCAGCGACCCCTATGTGTCCGTGTGCCTCTCGGGGGCTACCATTGCTCAAACTAGGATCATTCCTAACTGTGAAAACCCTTTGTGGGACGAGCATTTCTTAATTCCGGTTGCTCACCCTGCTCAGAAATTGGAGTTCCATGTCAAAGACAATGATGTTCTTGGTGCTGAGCTCATTGGAGTAGTGGATATATCTGCTAACAAGATTTTGTCCGGAGGCATCATCGACGATTGGTTTCCAATCGTTGGCCAGAGTGGAAACTGCTTGAAACCCTATCCTGAGCTGCATCTGTCTATCCAATTTAGGCCAGTTGGGGCAGAAGAGACAGGTTCTCTTGGGGTTCCTGATACCTATTTTCCTCTCCGAAAAGGAGGGTCTGTCACCCTTTATCAAGATGCACATGTACCGGATGGTAAGCTGCCTGAGATTCCACTTGAGGATGGGAAGGTCTTTCAGCATGGCAAGTGTTGGGAAGAGATTTGCCAAGCCATTTTGGAAGCTCACAACCTCATATATATTATAGGGTGGTCGGTTTACCACCCAGTGAAGCTTATCAGGGAGCCATCAAAGCCCCTGCCTTCTCAGGCAGAGCTTTCACTTGGAGAGTTACTGAAATACAAGTCGCAAGAAGGGGTCCGCGTGGTCATGCTCATTTGGGATGACAAAACCTCTCATGACAAATTTCTTTTGAAAACTGATGGTGTCATGCAAACTCACGATGAACAAACTAGAAAGTATTTTAAGAACTCCACTGTGCATTGTGTGCTAGCTCCACGTTATGCAAGCAGTAAGCTCAGTGTTTTCAAGCAACAGGTTGTGGGAACCCTTTTTTCTCACCATCAGAAGTGTGTGCTGGTAGACACTCAAGCTTCTGGGAATAATCGGAAAATAACTGCTTTTATTGGTGGCTTGGATCTCTGTGATGGGAGATATGATACTCCTGAGCATCGGCTTTTCGATGATCTAGATACTGTCTTTCACAATGATTTTCGTAATCCTACATTCCCGTCGAATTCGCGTGGGCCAAGGTTGCCATGGCACGACTTGCATTGCAAAGTCGAGGGTCCAGCTGCATATGATATATTGATCAATTTTGAACAAAGATGGAGAAAAGCAAAAAAATGGCGTGATTTTCGGCTAAAAAAGGTGACAAAGTGGCATGAGGATGCTTTACTAAGCCTAGAACGCCTTTCTTGGATGCTCACTCCATCTTCGAGTCCTGATGGTGAGAAAGCTGTCTATGTAACCGATGAACATGATCCTGAGAGTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCCGTCATGGGTTTCCCAAAGAGTGTTGAGCAAGCAAAGGCTCAGAACCTTTTCTGTGGAAAAAATTTGAAAGTAGATAAAAGCATTCATGCTGCTTATGTAAAAGCAATAAGATCAGCAGAACACTTCATCTACATTGAGAATCAGTATTTCCTGGGGTCCTCGTATAATTGGCATTCACACAAAGGTGCAGGTGCAAATCACTTGATTCCCATGGAATTGGCCTTAAAAATTGCCAGCAAGATCATCGCCAACGAACGTTTTTCTGCGTATATAGTTATACCAATGTGGCCAGAGGGAGTTCCTGGTAGTGTTGCTATTCAAGAAATTCTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATTGTTGCTGATGCTCTTAAAAAAGCAGGTCTTTCTCATCACTATCATCCTCAAGATTACCTCAATTTTTACTGTCTTGGAAAGCGTGAACCTTTGTCTTCAGATATTCCATTGCCAACTCAGACATCCGAAAATCGTGGTTTGAATTCATCCAAAAAATCAAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGACGAGTATGTTATCATGGGATCTGCAAATATTAATCAGAGATCCATGGATGGTTCAAGGGACACAGAAATAGCTATGGGTGCTTATCAGCCAAAATACACATGGAAAGAGAAGAATTCTCATCCACATGGCCAGGTGTATGGTTACAGAATGTCACTGTGGGCTGAGCACCTTGGTAGCCTTAAGGAAATATATGAAGAACCAAAGAGCCTAGAATGTGTTAGGTATGTGAACTATATAGCCAAACAAAACTGGGATGCATATGTATCAGAGGAAGGGAAGGAGCTGAGGGGACATTTGATGCAGTACCCGATTATGGTAGGCTCTGATGGAAAAGTGAGCCCGCTGCCAGATCATGAGTACTTTCCTGATGTTGGTGGTAAAGTTCTTGGATCACCCAATTCGCTTCCCGATGCACTAACCACATGA 2676 0.4335 MFMLIIILLFATRLSYLRYEFDEYVIAVTRFDWELFVALRLHQLMENRFRIIRESDLLMMDNAASEAVFLHGDLDLWILEAKALPNLDLSTETMRKCITMGNSCSPPFVKGLKTQSGRHKMITSDPYVSVCLSGATIAQTRIIPNCENPLWDEHFLIPVAHPAQKLEFHVKDNDVLGAELIGVVDISANKILSGGIIDDWFPIVGQSGNCLKPYPELHLSIQFRPVGAEETGSLGVPDTYFPLRKGGSVTLYQDAHVPDGKLPEIPLEDGKVFQHGKCWEEICQAILEAHNLIYIIGWSVYHPVKLIREPSKPLPSQAELSLGELLKYKSQEGVRVVMLIWDDKTSHDKFLLKTDGVMQTHDEQTRKYFKNSTVHCVLAPRYASSKLSVFKQQVVGTLFSHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFDDLDTVFHNDFRNPTFPSNSRGPRLPWHDLHCKVEGPAAYDILINFEQRWRKAKKWRDFRLKKVTKWHEDALLSLERLSWMLTPSSSPDGEKAVYVTDEHDPESWNVQVFRSIDSGSVMGFPKSVEQAKAQNLFCGKNLKVDKSIHAAYVKAIRSAEHFIYIENQYFLGSSYNWHSHKGAGANHLIPMELALKIASKIIANERFSAYIVIPMWPEGVPGSVAIQEILFWQGQTMSMMYKIVADALKKAGLSHHYHPQDYLNFYCLGKREPLSSDIPLPTQTSENRGLNSSKKSRRFMIYVHAKGMIVDDEYVIMGSANINQRSMDGSRDTEIAMGAYQPKYTWKEKNSHPHGQVYGYRMSLWAEHLGSLKEIYEEPKSLECVRYVNYIAKQNWDAYVSEEGKELRGHLMQYPIMVGSDGKVSPLPDHEYFPDVGGKVLGSPNSLPDALTT 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00365 891 Pfam Phospholipase D C terminal 812 881 IPR024632 -
Arst4g00365 891 PANTHER PHOSPHOLIPASE D 65 880 IPR015679 -
Arst4g00365 891 PANTHER PHOSPHOLIPASE D 65 880 IPR015679 -
Arst4g00365 891 SUPERFAMILY Phospholipase D/nuclease 237 501 - -
Arst4g00365 891 SUPERFAMILY Phospholipase D/nuclease 563 821 - -
Arst4g00365 891 Pfam PLD-like domain 739 773 IPR025202 -
Arst4g00365 891 Pfam Phospholipase D Active site motif 398 432 IPR001736 GO:0003824
Arst4g00365 891 Gene3D C2 domain 71 232 IPR035892 -
Arst4g00365 891 SMART C2_3c 73 200 IPR000008 -
Arst4g00365 891 FunFam Phospholipase D delta 269 512 - -
Arst4g00365 891 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 70 226 IPR035892 -
Arst4g00365 891 PIRSF PLD_plant 59 891 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst4g00365 891 ProSiteProfiles C2 domain profile. 54 201 IPR000008 -
Arst4g00365 891 Pfam C2 domain 72 203 IPR000008 -
Arst4g00365 891 PIRSF PLD_plant 59 891 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Arst4g00365 891 Gene3D Endonuclease Chain A 271 515 - -
Arst4g00365 891 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 397 432 IPR001736 GO:0003824
Arst4g00365 891 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 737 764 IPR001736 GO:0003824
Arst4g00365 891 Gene3D Endonuclease Chain A 535 790 - -
Arst4g00365 891 CDD C2_plant_PLD 67 224 - -
Arst4g00365 891 SMART pld_4 397 432 IPR001736 GO:0003824
Arst4g00365 891 SMART pld_4 737 764 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00365 Arst-Chr4 2746323 2751274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00365 57 890 Phospholipase D Gene Family (Wang group) AT2G42010 52.867 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00365 K01115 - gmx:100779740 1400.57