Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00327 ATGAGATTAAGGTATCCTTCCAGAGGCTGCTTTCATTCACCTCACAACCATAAGAATCTATGCTTCAGCGCACCACCAAGACAGACAGATCAAAGAACGAAGAGTAATATGTTAAAGGCAAAGGTATTCAATGGCGCGAACGTGTTCATGTCACGGAACCTGGTTCCGCCTGAGGTATTCGACACTCTTCATGATGTGCTCAAAGACAACGGTGCACAAGTGCACCTCTGCTGCGACCCTTCCCGCAATGGCCCCAATGATTACCATGTCATTTCTTGCAGTAAACATGAGAAGTTTGAGGATCTTAAAGCCAAAGGCTGCAAATTGCTTGGACCCAGATGTGTTCTTTCATGTGCTAAAGAACTTAAGCCTTTGCCTAAAGTTGGATTTACGTGTTGCCTTGCCATGGATGGTGTCAAAATACTTGCATCTGGCTTCGATACCAATGAGAAGCTTAAGATAGAAGAGATTGTGACTGAAATGGGTGGTCTTCTACATACTAAAGCATCACTGGATTTGAACTTTGTCATTGTGAAAAATGTTTTGGCTGCAAAATACAAGTGGGCTTTGAATATACTGAAGAAACCAATAGTTACTTATGAATGGTTAAAGCAATGCTCAGAGGAGCATCGTGTTGTTCCTCAGGAGTCATACAAGGTCCTTCCTTTCTCCGGGCTGACGATTTGTGTTACTGGGATTCCAGCAGATAAACGCAAAGAGATTGAGAAGCTTACTTTACAAAATGGTGGAAAGTACTCTGCAGAATTGACAAAGAAGTGCACTCATTTGATTTCTGATGCTCCTGAAGGTGACAAATATAAGGTAGCAAAACGCTGGGGCCATATTTATACTGTGACGAGGAAATGGTTTGATCAATCTATTGCTCGAAGAGCATGTCTGAACGAGGAGTCCTACCCAGTTCAGAATGGACCTGTATCTTCACAGAAAGTGATTAAGGACATAGATGTACAGCATAGCCAAGAAACGGATATTAGTAAATTTCAATCTGGAGTATCCTCAGCTGTTACAGATCCAAACATGCCGGTTTCTTCTTATGCTGAGTTTGTAGATAAAGACCAAGAAGCTACATGTTCAGAATACACGTCTTCTTTTACAAATGTTGCTACATTTGTCAAAGATACAAATGCTGAAGCACCTCGAGGAAAGCCCAGTGATGAATTGAACCTTGATGGCCCTGTTGCCAATGATTCTGAATCTGATGATAATGATCTGTACTTATCCGAGTGCAAAATCTTTCTTGTTGGCTTTGAAGCTTCTGACATGCGGAAACTAGTTAATATGGTGCGGAAAGGTGGAGGTTCCCGATATATGTCTTTAAATGCCAAGCTGACACACATAGTTGTTGGAAACCCTTCAGAATCGGAAAAGAAGGATGTAAGGAGTCTTGCTGCTTTAGGTGTCATTTATGTTGTTAAAACGTCCTGGCTTGAAGATTGTAACCGTGAAAAGAAAGAAGTCCCTGTTCTAAGGAGACACATTGCATCTGATCTACTTGTTCCAAAAGGAAGCATTGTCAAAGGAGCATCAACAAGCATGTCCATGGTTCAAGGTAAAAGCTGTGGTTTTCCTAAAAGCTTGCAGAGTGCTCAGGTGGTGGGAGTTATGGCCTCTGGAGGTGTAAAGCCAGTATCTTTGGGGAAAGATAAACTGGATGTGGGTACAAGTGTTCACTCATTCAGTAAAGCAATGGGGCAAAATCAACATGCTTCTAATAAGATGACAGCTCCAAAGATGACAGTGACACAACGTGATCCCAGTGTAGAATATGTTAAGTCCACAACAGTTTTCAAAGGGAAAATATTTTGTTTCTCGGATTTATTTCCTGAAGAAAGGAGAGCTGAGGTCATCGAATGGATACATCAAGGGGGAGGACAAGTAATAAGTGGGAAAGTAAAACATGGTGTCCATTTTACTGTTGAATGTCATGGTGTAACACCCATGATGACAGCAAATTCCCAAAGTACATATGTTTCGAGTCATTGGATACGATCTTGCTTACAGGCCGGATACCTAATGGATGTTGGCAGTCATATTCTTTATTCTCCACTTTCCTGTCGCGTTCCCTTGCCCGGGTTTGAAAGCTTTCGGTTTTGTGTTTCGCAATATGAGGAAAAAGAAAGAATTCTACTACGGAACTTGTGTTTTGTTTTGGGAGCTAAATTTGTGGAGAAGTTAACGAAGAAGGTCAGCCATTTGTTGTGTAAATTCAAGAATGGGCCCAAGTATGATGCTGCTTGTAAATGGGGGATCCGGTCAGTTACTGCCGAATGGCTGTTTGAATGTGTCAAACAGAATGGAGTTGTTGCCATAGACCATTTTTTACCAAAAGAAGTCACTGCTCAAGATCGGGAGGCAGGAATTTGTACTGTGAGTCAATTTCCTACTCAGGCCGTTCAAATGATAAGTGATCTGACGTCCCAGTATCCGAATCAATCACAAAATTCGACAGACAAAGTAAATAGAGGCATATATAGCGGACTTGCCAGTAATGGGACCGATTTAAAAATATCAAATATTCAGAGCAAAAAGGCAAGGCTTGTGGAAGATCCTGATAAGGTGTCTGCTGCAGTATATTCAGGTATTCATCATGTCAATGGAATGAATTTTTCTGAAGACAATACTGTAAAAGATGCTGGACAGGTTCCTCATGCTGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGGAGACAAGCAAGATGCATGATCAGAGGTCACCAGGGAGTACAGGGCGTGAGAGAAGTATCTATTCATCTGGTTGTACTATCGTTTGTGAAGAGAATTCCAATCCTAATGCTGTGTTTGGATTGTCAAAACACTGGTTAAACAGAGGTGACAGAAAAGATGATGATGGTGAGGCTTCTCGAGACAGACGAGCTGAAACTTATGATCGATTTAGCGAAACACAAACAGAATCTCAGGTTGTTGGTTATGAAGAGGATTTGTCTGGAAGGCAAATGCTTATTGACAGAGTTCGAACTCGAAGTAGCGCACAATAA 3024 0.416 MRLRYPSRGCFHSPHNHKNLCFSAPPRQTDQRTKSNMLKAKVFNGANVFMSRNLVPPEVFDTLHDVLKDNGAQVHLCCDPSRNGPNDYHVISCSKHEKFEDLKAKGCKLLGPRCVLSCAKELKPLPKVGFTCCLAMDGVKILASGFDTNEKLKIEEIVTEMGGLLHTKASLDLNFVIVKNVLAAKYKWALNILKKPIVTYEWLKQCSEEHRVVPQESYKVLPFSGLTICVTGIPADKRKEIEKLTLQNGGKYSAELTKKCTHLISDAPEGDKYKVAKRWGHIYTVTRKWFDQSIARRACLNEESYPVQNGPVSSQKVIKDIDVQHSQETDISKFQSGVSSAVTDPNMPVSSYAEFVDKDQEATCSEYTSSFTNVATFVKDTNAEAPRGKPSDELNLDGPVANDSESDDNDLYLSECKIFLVGFEASDMRKLVNMVRKGGGSRYMSLNAKLTHIVVGNPSESEKKDVRSLAALGVIYVVKTSWLEDCNREKKEVPVLRRHIASDLLVPKGSIVKGASTSMSMVQGKSCGFPKSLQSAQVVGVMASGGVKPVSLGKDKLDVGTSVHSFSKAMGQNQHASNKMTAPKMTVTQRDPSVEYVKSTTVFKGKIFCFSDLFPEERRAEVIEWIHQGGGQVISGKVKHGVHFTVECHGVTPMMTANSQSTYVSSHWIRSCLQAGYLMDVGSHILYSPLSCRVPLPGFESFRFCVSQYEEKERILLRNLCFVLGAKFVEKLTKKVSHLLCKFKNGPKYDAACKWGIRSVTAEWLFECVKQNGVVAIDHFLPKEVTAQDREAGICTVSQFPTQAVQMISDLTSQYPNQSQNSTDKVNRGIYSGLASNGTDLKISNIQSKKARLVEDPDKVSAAVYSGIHHVNGMNFSEDNTVKDAGQVPHAVPDVAAAIEDLLEETSKMHDQRSPGSTGRERSIYSSGCTIVCEENSNPNAVFGLSKHWLNRGDRKDDDGEASRDRRAETYDRFSETQTESQVVGYEEDLSGRQMLIDRVRTRSSAQ 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00327 1007 SUPERFAMILY BRCT domain 95 219 IPR036420 -
Arst4g00327 1007 ProSiteProfiles BRCT domain profile. 699 782 IPR001357 -
Arst4g00327 1007 FunFam Transcription coactivator 390 500 - -
Arst4g00327 1007 ProSiteProfiles BRCT domain profile. 218 307 IPR001357 -
Arst4g00327 1007 ProSiteProfiles BRCT domain profile. 136 220 IPR001357 -
Arst4g00327 1007 FunFam DNA topoisomerase II binding protein 1 223 315 - -
Arst4g00327 1007 SUPERFAMILY BRCT domain 601 688 IPR036420 -
Arst4g00327 1007 FunFam Transcription coactivator 595 692 - -
Arst4g00327 1007 SUPERFAMILY BRCT domain 695 783 IPR036420 -
Arst4g00327 1007 Gene3D BRCT domain 73 130 IPR036420 -
Arst4g00327 1007 Gene3D BRCT domain 694 786 IPR036420 -
Arst4g00327 1007 SMART BRCT_7 600 676 IPR001357 -
Arst4g00327 1007 SMART BRCT_7 220 297 IPR001357 -
Arst4g00327 1007 SMART BRCT_7 133 210 IPR001357 -
Arst4g00327 1007 SMART BRCT_7 40 122 IPR001357 -
Arst4g00327 1007 SMART BRCT_7 410 490 IPR001357 -
Arst4g00327 1007 SMART BRCT_7 696 772 IPR001357 -
Arst4g00327 1007 FunFam Transcription coactivator 133 221 - -
Arst4g00327 1007 Gene3D BRCT domain 596 691 IPR036420 -
Arst4g00327 1007 Pfam twin BRCT domain 226 289 IPR001357 -
Arst4g00327 1007 Pfam twin BRCT domain 703 764 IPR001357 -
Arst4g00327 1007 Gene3D BRCT domain 133 221 IPR036420 -
Arst4g00327 1007 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 44 1006 - -
Arst4g00327 1007 Gene3D BRCT domain 222 308 IPR036420 -
Arst4g00327 1007 Pfam BRCA1 C Terminus (BRCT) domain 136 206 IPR001357 -
Arst4g00327 1007 Pfam BRCA1 C Terminus (BRCT) domain 410 486 IPR001357 -
Arst4g00327 1007 SUPERFAMILY BRCT domain 410 494 IPR036420 -
Arst4g00327 1007 MobiDBLite consensus disorder prediction 382 407 - -
Arst4g00327 1007 CDD BRCT_TopBP1_rpt2_like 697 772 - -
Arst4g00327 1007 MobiDBLite consensus disorder prediction 950 974 - -
Arst4g00327 1007 ProSiteProfiles BRCT domain profile. 598 686 IPR001357 -
Arst4g00327 1007 CDD BRCT 139 206 - -
Arst4g00327 1007 ProSiteProfiles BRCT domain profile. 408 500 IPR001357 -
Arst4g00327 1007 MobiDBLite consensus disorder prediction 950 987 - -
Arst4g00327 1007 Gene3D BRCT domain 400 497 IPR036420 -
Arst4g00327 1007 SUPERFAMILY BRCT domain 222 308 IPR036420 -
Arst4g00327 1007 CDD BRCT_TopBP1_rpt2_like 222 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00327 Arst-Chr4 2482960 2493553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00327 37 1005 Core DNA Replication Machinery Family AT1G77320 50.048 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00327 K10728 - gmx:100804966 1312.75