Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00320 ATGGTCACATTTTTTAACTCCCTCACCTCCGCCACCGCCTCCGCCACGGACGATCCTCTCTTACCATTCCTCTGGAGTGTCAAGAAAGCTCTAGAAGGTTCCGGCGGTTCCAGCCAGAACCTGTTGAACTTACTAGGAGATTGCATTAGAAGCTTCAAGGATAGCGAACAGTACCGAAACGACGTCAGATTTCTCAAGATTTGGCTCCTCTATATGGGTGTTAGTTCAGATTTTGGAAGTGTTTTCATGGAAATGCTGAACTGCAATGTGTGTACCAAAAATGCTTCACTCTATGTGTGGTCTGCATGTTTCTTTGAGTTGAAAGGGAGGCTCCATGATGCCCTCACAATCTATCACCTTGGTATTTCCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAGGCACAGGCATTATGTCACCAGAGAATATCTGAAACTTGGAAGGCTGCTGAAAGGCAGAAGATTGATTATAAGGGATCCACAGAGTTGGGAAACATTGGCATTAATCCATGGGATTCCTCCATTTTGGAAGACCTGATGAAGAAGATAAATCCTACAATTAAAAAATTTTATGGGTATCACTTGAGCACTAAATCTTATACAGGAAAAGTGGCCTTATCTACTTTGAAGAATGCATCAAGGAACAAAGTTATAGAGATAGGCGGGAGGAAGTACCATATCAAAGGTTGCGCTGGACAAGGTGGTTTTGCTCAAGTATACAAGGCCTTTGTCAACAGTGATCCAAATGATGTTGTTGCGCTAAAGATACAAAAGCCAGCTTTCCCTTGGGAGTTTTACATGTATCGTCAGCTTGATATGCGGATCACTGGCAGAGAAAGGTCAAGCTATGGTTTGGCTCAGAGAATTCATCTGTATGCAGACTGTAGCATACTCATCTGTGACTATTTAGCTCATGGAACGCTACAGGATGTCATAAACACATATGCGGTCCAAGGGAAACCCATGGAAGAAGTTTTATGTATTTATTACACGATAGAAATGTTACACATGGTTGAAACTTTGCATGGTGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGATGACCTTACAGAAGAAGGGTTCTTGGACCGAAGTGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTAGACTGGGGAAGAGGGATTGTTCTGGATCTCTTTCCAGATGACATAGTATTTAAGGGTGATTGCGGAACTTCTGGATTTCGCTGCATTGAGATGCAAGAGGATAAGCCATGGAAATTTCAGGTAGACGCATACGGCCTTTGCGTTGTTGTCCATATGATGTTGCATAATTGCTATATGGAGACTGCCAAAGAAGAATCATCTGATGGAGGCTACATGTATCTTCCCAAACAACGCTTTAAACGTTACTGGAACGTTGCGCTCTGGAAGAATTTCTTCACCAAGATGTTAAATCAATACCCTGGCAATGATGATAGAAGGTTGCTGCAGGAGTTGAAGAAGTCCTTCCAGGACTATATAAGTTCCGATCCAAAGATGATAAAGGCACTAAGGGAGTTACTTGCAAAGCAAAGGACTTCTATGTGTTGTGCTTAG 1587 0.4285 MVTFFNSLTSATASATDDPLLPFLWSVKKALEGSGGSSQNLLNLLGDCIRSFKDSEQYRNDVRFLKIWLLYMGVSSDFGSVFMEMLNCNVCTKNASLYVWSACFFELKGRLHDALTIYHLGISRNAEPIEWLKKAQALCHQRISETWKAAERQKIDYKGSTELGNIGINPWDSSILEDLMKKINPTIKKFYGYHLSTKSYTGKVALSTLKNASRNKVIEIGGRKYHIKGCAGQGGFAQVYKAFVNSDPNDVVALKIQKPAFPWEFYMYRQLDMRITGRERSSYGLAQRIHLYADCSILICDYLAHGTLQDVINTYAVQGKPMEEVLCIYYTIEMLHMVETLHGVGLIHGDFKPDNLLIRYARDDLTEEGFLDRSGPWCDQGLCLVDWGRGIVLDLFPDDIVFKGDCGTSGFRCIEMQEDKPWKFQVDAYGLCVVVHMMLHNCYMETAKEESSDGGYMYLPKQRFKRYWNVALWKNFFTKMLNQYPGNDDRRLLQELKKSFQDYISSDPKMIKALRELLAKQRTSMCCA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00320 528 Gene3D - 4 158 - -
Arst4g00320 528 Pfam Protein kinase domain 225 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00320 528 Pfam Mad3/BUB1 homology region 1 11 122 IPR013212 -
Arst4g00320 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Arst4g00320 528 SMART mad3_bub1_i 4 122 IPR013212 -
Arst4g00320 528 SUPERFAMILY Protein kinase-like (PK-like) 222 485 IPR011009 -
Arst4g00320 528 ProSiteProfiles BUB1 N-terminal domain profile. 4 163 IPR013212 -
Arst4g00320 528 Gene3D Transferase(Phosphotransferase) domain 1 223 525 - -
Arst4g00320 528 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 159 522 IPR015661 GO:0007094
Arst4g00320 528 ProSiteProfiles Protein kinase domain profile. 225 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00320 528 SMART serkin_6 225 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00320 Arst-Chr4 2453461 2459044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00320 219 358 MAP Kinase Kinase Kinase Kinase AT1G53165 28.873 3.76e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Arst4g00320 Pkinase 2.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00320 K02178 - gmx:100802272 823.928