Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00314 ATGGTGGCAATGGCAGAGATGAGAGGAAGGAGTTACAGCCCGTCACCACCGCCGGCAAGGGGTTACAGCCGAAGAGGAAGGAGTCCGAGCCCAAGAGGTCGCTACTCTGGCCGCTCTAGAGATCTCCCTACCAGCCTTCTTGTTCGTAACCTTCGCCATGATTGTAGGCCTGAGGACCTTCGCAGACCTTTTGGTCAGTTTGGTGCCCTTAAGGACATTTACTTGCCCAAGGATTATTACACTGGAGAACCCCGTGGTTTTGGTTTTGTCCAGTATGTGGATCCTGCTGATGCGGCAGATGCCAAATATCATATGGATGGTCAAGTTCTACTTGGTCGGGAGTTGACTGTTGTCTTTGCCGAGGAGAATAGAAAGAAGCCAAGTGAGATGAGAACAAGGGAGAGAAGGGGCCGATATGATCGAAGAAGGTCTCCTCCTCGTTATTCTCGATCACCCCGCTACTCTCGATCCCCACCACCACGTCATAGATCTCGTTCCCATAGTCGTGACTATTATTCCCCTCCTCCTAAAAGAAGGGAATATTCAAGATCTCCCTCGCCTGAAGGTAGAAGGTACAGTCGAGAAAGATCATATTCACATCATAGTAGAGAGAGGTCATCCTCGCGTTCTCCACCCTATAACGGTGGCTCAAGGAGCCGTAGTCAGAGTCCGGCAAAGGGACCAACCCATAGCAGAAGTCCAACCCCAGACCGTGATGTTAGGGAACTGGCAGCGCGCAGGTCCCCAGCCAGTGAGAACGTCAAGTAA 768 0.5169 MVAMAEMRGRSYSPSPPPARGYSRRGRSPSPRGRYSGRSRDLPTSLLVRNLRHDCRPEDLRRPFGQFGALKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPSEMRTRERRGRYDRRRSPPRYSRSPRYSRSPPPRHRSRSHSRDYYSPPPKRREYSRSPSPEGRRYSRERSYSHHSRERSSSRSPPYNGGSRSRSQSPAKGPTHSRSPTPDRDVRELAARRSPASENVK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00314 255 Gene3D - 38 151 IPR012677 -
Arst4g00314 255 MobiDBLite consensus disorder prediction 124 255 - -
Arst4g00314 255 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 122 IPR000504 GO:0003723
Arst4g00314 255 SMART rrm1_1 45 118 IPR000504 GO:0003723
Arst4g00314 255 MobiDBLite consensus disorder prediction 232 248 - -
Arst4g00314 255 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 115 IPR000504 GO:0003723
Arst4g00314 255 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 43 236 - -
Arst4g00314 255 MobiDBLite consensus disorder prediction 1 43 - -
Arst4g00314 255 MobiDBLite consensus disorder prediction 164 207 - -
Arst4g00314 255 MobiDBLite consensus disorder prediction 124 147 - -
Arst4g00314 255 SUPERFAMILY RNA-binding domain, RBD 44 149 IPR035979 GO:0003676
Arst4g00314 255 MobiDBLite consensus disorder prediction 208 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00314 Arst-Chr4 2414398 2417741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00314 44 174 Eukaryotic Initiation Factors Gene Family AT4G34110 25.954 5.04e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00314 K12900 - gmx:100775883 246.514