Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00287 ATGCATACAAACTCTCAACCAGAAATCAAAATGCGCTGCTGTGCCCTTCCTAGTTCTTATCACCATCACCGATTAACATCGCCACCCAAAACAATTTTCCAATTCCCATCCAATACAACAACCCGCTACTATTCGCCCAAACCCGACATTATTACCAATCCGACCCGACCCGCGTTGCGACTGAGCCTCAGAGCAAATGCTTCTACGTCGTCGTTCGATGCGTTAGCGGTGGCGACGGAGGAAGCGAATGCGAGCTTGTACGAGGTTCTTGGCGTGCCGGAGTGGGTGGCGGTGGCGGAATTGAAGCAGGCGTACAAGAAGCTTGCGAGGAAGTTCCATCCGGACGTGTCGCCACCGGGTCGGGTTGAAGAGTACACAAGGAGGTTTATTCGTGTGCAGCAGGCCTACGAGACTCTCTCTGATCCCGCAATGAGAGAGCTCTATGATAGAGATATGGCTATGGCCGTCAAGTTCCCCTTCTCCTCTCGCTTCGGCCACCGCCGCGCCACCACCTTCCACCGTCAACATCCCCACCCTCACTGTCACACGGTTATGGAACAAAGAAGTGAATGGAAAACTCAATGGGAGTCACAACTCTATGGGCTGAAGAGAAGAAGCAAAATAAAAAATAGTGGAGTCAATGATTCTTGGGCAGCAAAAATGCGAAATATTAATAATAACGTTTTTGTCGAGGAAGAAACTATTTTCACTCCTCCTGTTTAA 723 0.4979 MHTNSQPEIKMRCCALPSSYHHHRLTSPPKTIFQFPSNTTTRYYSPKPDIITNPTRPALRLSLRANASTSSFDALAVATEEANASLYEVLGVPEWVAVAELKQAYKKLARKFHPDVSPPGRVEEYTRRFIRVQQAYETLSDPAMRELYDRDMAMAVKFPFSSRFGHRRATTFHRQHPHPHCHTVMEQRSEWKTQWESQLYGLKRRSKIKNSGVNDSWAAKMRNINNNVFVEEETIFTPPV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00287 240 Gene3D DnaJ domain 70 162 IPR036869 -
Arst4g00287 240 SMART dnaj_3 84 144 IPR001623 -
Arst4g00287 240 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Arst4g00287 240 PRINTS DnaJ domain signature 124 144 IPR001623 -
Arst4g00287 240 PRINTS DnaJ domain signature 87 105 IPR001623 -
Arst4g00287 240 PRINTS DnaJ domain signature 105 120 IPR001623 -
Arst4g00287 240 ProSiteProfiles dnaJ domain profile. 85 152 IPR001623 -
Arst4g00287 240 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 66 226 - -
Arst4g00287 240 Pfam DnaJ domain 86 149 IPR001623 -
Arst4g00287 240 CDD DnaJ 87 141 IPR001623 -
Arst4g00287 240 SUPERFAMILY Chaperone J-domain 83 164 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00287 Arst-Chr4 2272793 2275685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00287 87 149 C2H2 Transcription Factor Family AT1G74250 40.909 2.81e-06 45.8