Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00284 ATGGCATTGTGTAACAAGCTTGGAAATTTCTTGAGACAGAGTGCTTCCGGAAGCGGATTAGCACCTGTTCCATCGATGCTCAATTATATTCGCTGCATGTCCTCAAGCAGGCTTTTCATTGGGGGCCTTTCATACGGAGTTGATGACCAGTCTCTTCGGGATGCATTCTCCGGCTTTGGGGATGTGGTTGATGCAAGGGTGGTCACTGATAGAGACACCGGAAGATCAAGAGGTTTTGGATTTGTCAACTTCTCAAGCGACGAGTCTGCAAGCTCAGCACTCAGTGGAATGGATGGGCAGGATCTAAACGGCCGAGTGATCAGGGTGAGCTATGCTAATGATAGGCCTACTGGACCTCGGGGTGGTGGCGGTGGTTTCGGTGGTGGTGGTGGTGGTTATGGGGGAGGTGGTTACCGTAGAGGTGGAGGTGGTGGTTATGGTGATCCAGACTTCTAG 456 0.5154 MALCNKLGNFLRQSASGSGLAPVPSMLNYIRCMSSSRLFIGGLSYGVDDQSLRDAFSGFGDVVDARVVTDRDTGRSRGFGFVNFSSDESASSALSGMDGQDLNGRVIRVSYANDRPTGPRGGGGGFGGGGGGYGGGGYRRGGGGGYGDPDF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00284 151 Gene3D - 32 148 IPR012677 -
Arst4g00284 151 SMART rrm1_1 37 110 IPR000504 GO:0003723
Arst4g00284 151 MobiDBLite consensus disorder prediction 112 151 - -
Arst4g00284 151 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Arst4g00284 151 CDD RRM2_NsCP33_like 37 112 - -
Arst4g00284 151 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Arst4g00284 151 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 34 145 - -
Arst4g00284 151 FunFam Glycine-rich RNA-binding protein 2 25 149 - -
Arst4g00284 151 SUPERFAMILY RNA-binding domain, RBD 31 145 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00284 Arst-Chr4 2231491 2233687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00284 35 126 Eukaryotic Initiation Factors Gene Family AT1G49760 39.130 1.60e-14 67.8