Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00273 ATGCCGCAGAAATCAATGGCGAAGAAGACGGCGTACGAGAAGATAAGGGAGGAGTTGAAACTTGATGCAAAGCCAAAGATGAACTTGGCTTCCTTTGTGACCACGTCAATGGAGGAAGAATGTAACATACTCATGATGGAATCCTTCAACAAGAACTATGTTAACATGGACGAGTACCCTGCCACCACTCAACTTCACAATAGATGTGTGAACATGATAGCACGTTTGTTCAACGCCGAAATTGGAGAAAATGAGAACGCAATTGGAACAGGAACTGTTGGATCTTCAGAGGCCATAATGCTGGCGGGCCTTGCATTCAAGAAAAAATGGCAGAACAAGCTCAAGGCCCAAGGAAAGCCCTATCATAAGCCCAACATTGTCACTGGTGCCAATGTCCAGGTATGTTGGGAAAAATTTGCAATGTATTTCGATGTAGAGTTGAGAAAAGTGGATGTTGGAGAAGGGTATTATGTGATGGACCCTACTAAAGCCATTGAAATGGTTGATGAGAACACTATCTGTGTGGCTGCAATCTTGGGTTCAACTTATAATGGCGAATTTGAAGATGTCAAGTTGCTTAACGACCTCTTACTACAACAAAACAAGAAAAATGGATGGGATACACCGATTCATGTTGATGCAGCAAGTGGTGGGTTTGTTGCTCCATTTCTTTATCCAGAGCTAGAATGGGATTTCAGGCTTCCATTGGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGTCTTGTTTATGCAGGCATTGGTTGGGTTATTTGGAGAAGTAAAGAGGACTTGCCTCAAGAGCTTATCTTCAATATTAATTACCTTGGAGCAGACCAACCCACCTTTACCCTTAATTTTTCTAAAGGGTCTAGTCAGATTATTGCACAATATTATCAACTAGTTCACCTTGGCAGAGAGGGATACCAAAGAGTAATGGAAAAGTGCAAAGAAAATGCAATGGTGGTGAAACAAGGATTGGAGAAAACAGGGTGCTTTAACATACTCTCAAAGGACAATGGTGTTCCTCTGGTAGCCTTTTCTCTTAAGGACACAAGTCACGGTGACGAGTTCAAGATATCGGAGATGCTACGCCGCCTCCACGGTTGGGTTGTGCCGGCTTATCCAATGCCATCCGGTGCGGAGCATGTCAATGTGCTCCGCGCGGTGGTTAGAGCCGAGTTTTCGCGCGAGATGGCCGAAAAACTCGTGCTCGACATAGAAAATGTGTTGCAAGAACTTGGGAAGCTTGGTCCCAAGTACACACCAAAAGTGACAAAAATTGCAAAGAGGAAAATCATTGTCCGAGAATCCAACAAGCATCACAAAGTCTTGGCAGCATAG 1344 0.4382 MPQKSMAKKTAYEKIREELKLDAKPKMNLASFVTTSMEEECNILMMESFNKNYVNMDEYPATTQLHNRCVNMIARLFNAEIGENENAIGTGTVGSSEAIMLAGLAFKKKWQNKLKAQGKPYHKPNIVTGANVQVCWEKFAMYFDVELRKVDVGEGYYVMDPTKAIEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLQQNKKNGWDTPIHVDAASGGFVAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPQELIFNINYLGADQPTFTLNFSKGSSQIIAQYYQLVHLGREGYQRVMEKCKENAMVVKQGLEKTGCFNILSKDNGVPLVAFSLKDTSHGDEFKISEMLRRLHGWVVPAYPMPSGAEHVNVLRAVVRAEFSREMAEKLVLDIENVLQELGKLGPKYTPKVTKIAKRKIIVRESNKHHKVLAA 447
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00273 447 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 350 IPR002129 GO:0016830|GO:0019752|GO:0030170
Arst4g00273 447 Gene3D - 1 34 - -
Arst4g00273 447 Gene3D - 35 329 IPR015421 GO:0003824
Arst4g00273 447 FunFam Glutamate decarboxylase 330 418 - -
Arst4g00273 447 Gene3D - 330 417 - -
Arst4g00273 447 SUPERFAMILY PLP-dependent transferases 1 414 IPR015424 -
Arst4g00273 447 FunFam Glutamate decarboxylase 35 329 - -
Arst4g00273 447 NCBIfam glutamate decarboxylase 1 414 IPR010107 GO:0004351|GO:0006536|GO:0030170
Arst4g00273 447 PANTHER GLUTAMATE DECARBOXYLASE 1 432 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst4g00273 Arst-Chr4 2044098 2047720 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00273 1 426 Calmodulin-binding Proteins AT5G17330 73.474 0.0 674
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00273 K01580 - gmx:100812201 722.235