Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00234 ATGGCCACCCCCAAATTACATTCCATAACCCTACTACCATTTCTCTCTCCTCTCTTCTTCTTCTTCTTCTTCTTCACTCTCTCCATTGCCGACGATGCCGCCGTCATGTCCAACCTCCGCAAGTCACTCACCGGAGCCCCTTCCGACTGGTCCACCACCTCCTTCTGCAAGTGGTCCGGCATCACCTGTGACACCTCCAACCGCGTAACCTCCATCAATCTCCCCAAGAGCTCCATCTCGGGAACCCTCCCTTCCGATCTCAACACCCTCACGCAGCTAACCACTCTCTCCCTCTCCTCGAACGCGCTCTCCGGCGCGTTGCCCTCACTCGCTAACCTCACCATGCTCCAAACCGTACTACTAGACCAAAACAACTTCACCTCAATCACCAAAGCCGCCTTCTCGGGACTCACGAGCCTCCAGGAGCTAAGCATGACCACCAATGTCAACCTCCAGCCCTGGACGATTCCCACCGAGTTGACTCAGTCTACCGAACTCGTCACCCTCGATCTCGGCACCACCAACCTTTTCGGCACCTTGCCGGACTTCTTCGACTCGTTTCCTGGCCTTCAGAACCTACGCCTCTCCTACAACAAACTCACCGGTCAGCTGCCCCGGTCACTCGCCGGATCTTCCGTACAGAATCTCTGGCTCAACAACCAGGACGACAGCGCTGGGTTTACCGGCACCGTCGATGTACTCGCGTCAATGACGCACTTGAATCAGGTCTGGCTTCAGAAGAATCAGTTTACCGGTCCCATTCCGAATTTGTCAAACTGCACCGATTTGTTCGATTTGCAGCTTCGCGATAACCAGTTAACCGGCGTTGTACCCGTTGCACTGACCACAATGTCGAGTTTGAGGAACGTTTCTTTGGACAATAACAGACTCCAGGGTCCGACTCCGGCGTTCGGGAAAGATGTGACGGTCACGCTTACTGGGCTCAACAGATTTTGCGCGAAAGCTGGAGAGTCTTGTGATGATAGGGTGAACACCCTTCTTGCCGTTGCGGCCGGGTTTGACTACCCGTACCGGTTGGCGGACTCTTGGGATGGCAACAATCCTTGTAATGATTGGACCTCTGTTGTGTGCGTTGGGGAGAAGATTGTAACCTTGAATTTCAAGAATCTTGATTTGAACGGGACGATCTCGCCGGCTTTGGCGAATTTAACGGATTTGAAGAACTTGTATCTGAATGACAATAATTTGACAGGCTCAATACCGGAGAGTTTGACGAGTTTGGCTCAGCTCGAGGTTCTGGATGTTTCTAATAACAATTTGACGGGGAAGATTCCGAGTTTCCCTTCTAAGGTGAAGTTCAGCCACGGTGGCAATGCTTTGCTTGGGGTTTCTGGTGGAGGTGGAGGAAGTGGGAATGGCTCATCTTCAAATTCTGGTGATGCACCAAGTGGAAGTCCTTCTAAGGCATCGAGTGGTACTTCGCTTTCTCCTGGTTGGATTGTAGGTATAGCCATTATTGCCGTGTTTTTCGTTGCAGTTGTTTTGTTTGTGTTTTGCAAGTGTTATGCCAAGAACAGGCACAAGAAATTTGGAAGGGTAAATAACCCTGAAACAGGGAAAGGAGAGGTTAAGATTGATATGGTGGGTGCTTCCAGTTCCAATGGATTTGTGGGAGCAGGGGGAGCAACAAGTGAGTTGCAAAGCCAGGGTAGCGAGCAAAACGAACAGCTCCCTGTTTTTGAAGGTGGGAATGTCACAATTTCGATCCAAGTTCTTAGGCAAGTTACAAATAATTTCAGTGAGGATAACATTTTGGGTAGGGGAGGGTTTGGTGTTGTGTATAAAGGGGAATTGCATGATGGGACTAAGATTGCAGTGAAGAGGATGGAATCGGTTGCAATGGGAACCAAAGGAATGAATGAGTTTCAAGCAGAGATTGCAGTTCTAACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATATTGCATGAATGGCAATGAAAGACTTCTTGTGTATGAGTATATGCCTCAAGGAACACTAACACAGCATCTGTTCGATTGGCATGAGAATGGATGCGCTCCTTTGACATGGAAACAAAGGGTGGCAATAGCCCTGGATGTAGCAAGGGGAGTGGAATACTTGCACAGTTTAGCTCAGCAAAGCTTCATTCATAGAGACTTGAAACCCTCGAACATTCTGTTGGGTGATGACATGAGAGCTAAGGTTGCTGATTTTGGTTTGGTTAAAAATGCACCTGATGGAAAATATTCAGTTGAGACACGGTTAGCTGGAACGTTTGGATATCTTGCACCCGAATATGCAGCTACTGGGAGAGTGACAACAAAAGTCGACATCTACGCATTTGGGGTAGTTTTGATGGAACTTATTACAGGCAGAAGGGCCTTGGATGATACCGTGCCTGATGATAGGTCACACTTGGTTTCATGGTTCCGCAGGGTACAAATTAACAAGGAGAACATCCCAAAGGCAATTGATCAAACCCTTGATCCTGACGAGGAAACCATGGAGAGCATTTATAAGGTGGCCGAGCTTGCAGGCCATTGCACTGCGCGCGAACCATACCAAAGGCCTGATATGGGGCACGCGGTGAATGTGTTGGTCCCCCTTGTAGAGCAATGGAAGCCTACAAACCATGAAGAAGAAGAAGGTTATGGCATTGATCTCCACATGAGCCTTCCTCAAGCTCTCAGAAGGTGGCAAGCCAATGAAGGTACTTCCACCATGTTCAATGACATGTCCTTCTCCTCACAAACGCAATCGAGCATTCCGGCGAAACCTTCTGGGTTTGCTGACTCCTTTGATTCAATGGATTGCCGGTAA 2808 0.489 MATPKLHSITLLPFLSPLFFFFFFFTLSIADDAAVMSNLRKSLTGAPSDWSTTSFCKWSGITCDTSNRVTSINLPKSSISGTLPSDLNTLTQLTTLSLSSNALSGALPSLANLTMLQTVLLDQNNFTSITKAAFSGLTSLQELSMTTNVNLQPWTIPTELTQSTELVTLDLGTTNLFGTLPDFFDSFPGLQNLRLSYNKLTGQLPRSLAGSSVQNLWLNNQDDSAGFTGTVDVLASMTHLNQVWLQKNQFTGPIPNLSNCTDLFDLQLRDNQLTGVVPVALTTMSSLRNVSLDNNRLQGPTPAFGKDVTVTLTGLNRFCAKAGESCDDRVNTLLAVAAGFDYPYRLADSWDGNNPCNDWTSVVCVGEKIVTLNFKNLDLNGTISPALANLTDLKNLYLNDNNLTGSIPESLTSLAQLEVLDVSNNNLTGKIPSFPSKVKFSHGGNALLGVSGGGGGSGNGSSSNSGDAPSGSPSKASSGTSLSPGWIVGIAIIAVFFVAVVLFVFCKCYAKNRHKKFGRVNNPETGKGEVKIDMVGASSSNGFVGAGGATSELQSQGSEQNEQLPVFEGGNVTISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGTKGMNEFQAEIAVLTKVRHRHLVALLGYCMNGNERLLVYEYMPQGTLTQHLFDWHENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDIYAFGVVLMELITGRRALDDTVPDDRSHLVSWFRRVQINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEEGYGIDLHMSLPQALRRWQANEGTSTMFNDMSFSSQTQSSIPAKPSGFADSFDSMDCR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00234 935 Pfam Leucine rich repeat N-terminal domain 328 364 IPR013210 -
Arst4g00234 935 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Arst4g00234 935 FunFam Receptor-like kinase TMK4 30 324 - -
Arst4g00234 935 ProSitePatterns Protein kinases ATP-binding region signature. 592 614 IPR017441 GO:0005524
Arst4g00234 935 Gene3D Ribonuclease Inhibitor 31 324 IPR032675 -
Arst4g00234 935 Gene3D Phosphorylase Kinase; domain 1 547 663 - -
Arst4g00234 935 FunFam receptor protein kinase TMK1 548 663 - -
Arst4g00234 935 MobiDBLite consensus disorder prediction 906 935 - -
Arst4g00234 935 SUPERFAMILY L domain-like 54 432 - -
Arst4g00234 935 FunFam Leucine-rich repeat receptor-like kinase 328 451 - -
Arst4g00234 935 ProSiteProfiles Leucine-rich repeat profile. 92 114 IPR001611 GO:0005515
Arst4g00234 935 Pfam Protein tyrosine and serine/threonine kinase 589 860 IPR001245 GO:0004672|GO:0006468
Arst4g00234 935 SMART serkin_6 586 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00234 935 SMART LRR_typ_2 113 136 IPR003591 -
Arst4g00234 935 SMART LRR_typ_2 414 436 IPR003591 -
Arst4g00234 935 SMART LRR_typ_2 187 210 IPR003591 -
Arst4g00234 935 SMART LRR_typ_2 390 413 IPR003591 -
Arst4g00234 935 SMART LRR_typ_2 284 307 IPR003591 -
Arst4g00234 935 SMART LRR_typ_2 90 112 IPR003591 -
Arst4g00234 935 CDD STKc_IRAK 592 865 - -
Arst4g00234 935 MobiDBLite consensus disorder prediction 453 477 - -
Arst4g00234 935 MobiDBLite consensus disorder prediction 455 477 - -
Arst4g00234 935 Gene3D Transferase(Phosphotransferase) domain 1 664 885 - -
Arst4g00234 935 PANTHER OSJNBA0070M12.3 PROTEIN 18 935 - -
Arst4g00234 935 PANTHER OSJNBA0070M12.3 PROTEIN 18 935 - -
Arst4g00234 935 SUPERFAMILY Protein kinase-like (PK-like) 562 871 IPR011009 -
Arst4g00234 935 ProSiteProfiles Protein kinase domain profile. 586 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00234 935 FunFam receptor protein kinase TMK1 664 881 - -
Arst4g00234 935 MobiDBLite consensus disorder prediction 906 922 - -
Arst4g00234 935 Gene3D Ribonuclease Inhibitor 327 451 IPR032675 -
Arst4g00234 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00234 Arst-Chr4 1784010 1788296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00234 69 862 Receptor kinase-like Gene Family AT5G07280 32.475 2.48e-95 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Arst4g00234 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00234 K00924 - gmx:100781851 1308.51