Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00184 ATGCCACCTGGTTTTGAGTACAACATCGATGATCTGTACCAGGAAGCTAAGAGAAGATGGCTGAAGCCGGTGGAAGTGCTATACATTTTGCGGAATCATGACCAGTGCAAGTTCACAAATATTCCCCCTCAAAAGCCAACAAGTGGATCCTTGTTTCTATTTAATAGAAGAATCATGCGTTTCTTCCGGAAAGACGGTTATAATTGGCGGAAGAAAAGGGATGGAAGAACTGTGGGAGAAGCACATGAACGGCTTAAGATTGGAAACGTTGAAATACTAAATTGTTACTATGCACATGGAGAGGAGAACCGTAGTTTCCAGAGGAGGAGCTACTGGATACTGGATCCGGCATATGAGCATATTGTTCTTGTGCATTACAGAGAAACAAAGGAGGGGAACTCAGGTTCTGGACCTATCCCACCATTGTCTGGAGGCTCCTCTCCTGAATTTAGTCAGAATCGAAGCTCACGTACTACGCTTGACCCAGGGACAATATCCGTGTTTGGTGATTCATGTGAACCTTCTCAGAATTTCTCCAGTCCTGAGTCTATGGAAGTTACCTCTAATATCATCAGAAACAATGGAATGGATCAGTTAGATGAAACAGATGCAGTCTTGCGCCAATTGAAGCAACAGTTAAGTTTGGAAAAGGAGAACTGTGAAGAAATTTCTCCCACATACAATGAGCCTGAGATTTTACATGATTTGAACCCTCAGCATGATGAAAGAGTGATGTACAAGCATAAATCTGCAGCTTTCACTGTGCCAAATGATTATGGACAAGCCGCTTATGAATGCAATGGAAGACAAGGTGACAATGGTAAAAATTATAATCAACTATTAAACTGCGATCACCCAGATGCAAATGAAAATGCCTTATCTTGGACAGAGGTGCTCGAGTCGTGTAAGCCTGCAAGCTTGACCAATTTACCAGAGCAACATGCATATGAGGCATATGGAAATGATAGCTCCCTACATTCTTCACGAGGTGTACTGATTGACAGTCAACAAAACAGTCGGTGGATAAACTCCAACAGTATTAATGCTGAAAACTCTGTCTTCTCTTGTCCTCAAGATGGTGGAACCAAATTTCCTCTGTATTCACCGGTTGAAGCTGAAAGTTCTGACTATGCGACATTGTTTCATCAAATCCAAATTCCACCACCTCTGGATGCAGATTCATGCCTGACTATTTCACAGAAACAAAAATTCACAATTAGGAGAATCTTCCCAGAGTGGTGTTATGCCACAGAGACTTCAAAGGTGGTCATTATTGGGTCATTTCTCTGTCTTCCCTCAAATTCTACCTGGGCTTGTATGTTTGGTGATATTGAAGTGCCTGCTGAGATAATTCAGGATGGTGTTATTTGTTGTGAAGCTCCCCCCCACCTTCCTGGAAAGGTTACTCTGTGCGTTACTTCTGGAAATCGGGAGTCCTGCAGTGAATTTCGAGAGTTTGAGTTTCGCAATAAGACTAATAATTGCACTCGTTGTAACTCAATGGAAACAGAAACTGCTAGAAGCCAAGACGAGCTGTTATTACTTGTTACATTTGCACAGATGCTCCTTTCTCCTCCAACTAAAAAGAATGACAACATGGAACCTGTATATCATCTTCCAGTGGAACAGAAAGCAGATGATGATTCATGGAGCCATGTGATAGAGGCTCTTCTAGTAGGCAGTGGAACTTCATCAGGTACTATTGATTGGCTTCTTGAAGAGCTGCTGAAGGATAGGCTACAGCTGTGGCTTTCTGGCAAATCCTGGGAAATAGATGAAGCAACCGGCTGCCCTTTGTCCAAGAAAGAGCAGGGGATTATACACATGGTTGCTGGATTGGGTTATGAGTGGGCCTTGATCCCTATTCTCAGTTGTGGTGTGAATATAAATTTTCGTGACATCAGGGGGTGGACTGCCCTTCATTGGGCTGCACGGTTTGGAAGGGAAAAAATGGTTGCTTCACTTATTGCTGCTGGTGCATATGCTGGAGCAGTAACTGATCCAACATCTGCAGACCCAGATGGGAAAACTGCTGCAGCTATTGCTGCCAGCAATGGCCACAAGGGACTGGCCGGTTATCTTTCAGAAGTAGCTCTGACTAGCCATCTTTCATCTCTCACCTTTGGGGTTTCACTGGCTGCTGTCAGAAATGCTGCTCTCGCTGCTGCTCGGATACAGGCTGCATTTCGTGCTCATTCTTTCAAAAAACGGAGGGAGAGGGAAGCTGCTGCAGCAGCCGCTGCCGCTGCTGCTGGTCTAGATGGGTATGATATCGATGCTGATGGCATTGGTAACATTCTAGAGCTTTCTCCCAGGTTAAGTCATAGCTTTGGGAGGCTTCGTGATTACAATGCAGCTGCTTTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCTTAGCACTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTCGGAAGCAATACAAGATAATAGTATGGGCAGTTGGAGTCTTGGAGAAGGTAGTGCTACGATGGCGGAGAAAAGGAGCTGGTCTACGAGGTTACCGACAAGACTCAATTGATGAAAATGACGATGATGATTTTCTCAAGGTGTTCAGGAAGCAGAAAGTGCATGTAGCAATTGAAAAAGCTTTTTCACGGGTGCTGTCCATGGTACACTCTAGTGGTGCCCGTCAACAATATCGCCGCATGCTTGAGATGTATCGTGAAGCTAAGGCTGAACTTGGTAGCATGAATGATGAAGCGCCATTAGCGACGTCTGTAGGGGACACATCAAATATAGATGATGATGATGAACTCTTTCAAATTCCTGGGGGCTGGGAGACACTCTAG 2847 0.444 MPPGFEYNIDDLYQEAKRRWLKPVEVLYILRNHDQCKFTNIPPQKPTSGSLFLFNRRIMRFFRKDGYNWRKKRDGRTVGEAHERLKIGNVEILNCYYAHGEENRSFQRRSYWILDPAYEHIVLVHYRETKEGNSGSGPIPPLSGGSSPEFSQNRSSRTTLDPGTISVFGDSCEPSQNFSSPESMEVTSNIIRNNGMDQLDETDAVLRQLKQQLSLEKENCEEISPTYNEPEILHDLNPQHDERVMYKHKSAAFTVPNDYGQAAYECNGRQGDNGKNYNQLLNCDHPDANENALSWTEVLESCKPASLTNLPEQHAYEAYGNDSSLHSSRGVLIDSQQNSRWINSNSINAENSVFSCPQDGGTKFPLYSPVEAESSDYATLFHQIQIPPPLDADSCLTISQKQKFTIRRIFPEWCYATETSKVVIIGSFLCLPSNSTWACMFGDIEVPAEIIQDGVICCEAPPHLPGKVTLCVTSGNRESCSEFREFEFRNKTNNCTRCNSMETETARSQDELLLLVTFAQMLLSPPTKKNDNMEPVYHLPVEQKADDDSWSHVIEALLVGSGTSSGTIDWLLEELLKDRLQLWLSGKSWEIDEATGCPLSKKEQGIIHMVAGLGYEWALIPILSCGVNINFRDIRGWTALHWAARFGREKMVASLIAAGAYAGAVTDPTSADPDGKTAAAIAASNGHKGLAGYLSEVALTSHLSSLTLXGVSLAAVRNAALAAARIQAAFRAHSFKKRREREAAAAAAAAAAGLDGYDIDADGIGNILELSPRLSHSFGRLRDYNAAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKQYKIIVWAVGVLEKVVLRWRRKGAGLRGYRQDSIDENDDDDFLKVFRKQKVHVAIEKAFSRVLSMVHSSGARQQYRRMLEMYREAKAELGSMNDEAPLATSVGDTSNIDDDDELFQIPGGWETL 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00184 949 MobiDBLite consensus disorder prediction 130 181 - -
Arst4g00184 949 SUPERFAMILY E set domains 405 489 IPR014756 -
Arst4g00184 949 Pfam IPT/TIG domain 405 479 IPR002909 -
Arst4g00184 949 Coils Coil 199 219 - -
Arst4g00184 949 CDD IPT 405 489 - -
Arst4g00184 949 Gene3D - 784 831 - -
Arst4g00184 949 Gene3D Immunoglobulins 399 490 IPR013783 -
Arst4g00184 949 Coils Coil 900 920 - -
Arst4g00184 949 FunFam Calmodulin-binding transcription activator 2 783 831 - -
Arst4g00184 949 SUPERFAMILY Ankyrin repeat 606 697 IPR036770 -
Arst4g00184 949 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Arst4g00184 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 835 IPR027417 -
Arst4g00184 949 Pfam IQ calmodulin-binding motif 809 828 IPR000048 GO:0005515
Arst4g00184 949 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Arst4g00184 949 ProSiteProfiles IQ motif profile. 722 748 IPR000048 GO:0005515
Arst4g00184 949 FunFam Calmodulin-binding transcription activator 2 399 493 - -
Arst4g00184 949 Pfam Ankyrin repeats (3 copies) 612 695 IPR002110 GO:0005515
Arst4g00184 949 Gene3D - 491 697 IPR036770 -
Arst4g00184 949 SMART CG_1_2 12 130 IPR005559 GO:0003677
Arst4g00184 949 MobiDBLite consensus disorder prediction 139 181 - -
Arst4g00184 949 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Arst4g00184 949 SMART ANK_2a 674 703 IPR002110 GO:0005515
Arst4g00184 949 SMART ANK_2a 635 667 IPR002110 GO:0005515
Arst4g00184 949 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Arst4g00184 949 ProSiteProfiles IQ motif profile. 807 831 IPR000048 GO:0005515
Arst4g00184 949 FunFam Calmodulin-binding transcription activator 4 isoform A 515 700 - -
Arst4g00184 949 ProSiteProfiles Ankyrin repeat region circular profile. 635 660 - -
Arst4g00184 949 SMART iq_5 783 805 IPR000048 GO:0005515
Arst4g00184 949 SMART iq_5 718 740 IPR000048 GO:0005515
Arst4g00184 949 SMART iq_5 806 828 IPR000048 GO:0005515
Arst4g00184 949 ProSiteProfiles Ankyrin repeat profile. 635 667 IPR002110 GO:0005515
Arst4g00184 949 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00184 Arst-Chr4 1422596 1431080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00184 5 942 CAMTA Transcription Factor Family AT1G67310 46.844 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst4g00184 CG-1 5.4e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00184 K21596 - gmx:100791430 1139.02