Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00166 ATGTCTACCGCCACATCCAGCTCTTGGGGTACTGCGCTCGTTAATATCTCTCCTTACACCTTCTCCGCCATCGGCATCGCCGTCTCCATCGGTGTCTCAGTTCTCGGTGCTGCTTGGGGGATTTACATAACTGGTAGCAGCTTGATCGGTGCTGCAATCAAGGCTCCCCGAATCACTTCCAAGAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATTTATGGTGTTATTGTGGCCATCATTCTACAAACAAAATTAGAAAGCGTTCCTTCATCACAGATCTATGCAGCCGAGTCTCTTAGGGCTGGATATGCAATCTTTGCTTCTGGACTTATTGTTGGCTTCGCAAATCTTGTTTGTGGATTGTGTGTAGGAATAATTGGAAGCAGTTGTGCGTTGTCTGATGCTCAAAACTCCTCTCTCTTTGTGAAGATTCTTGTGATTGAAATTTTTGGTAGTGCTCTTGGGCTATTTGGAGTTATTGTTGGAATCATCATGTCAGCTCAAGCAACATGGCCAACAAAGGTTTAA 534 0.4438 MSTATSSSWGTALVNISPYTFSAIGIAVSIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSQIYAAESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00166 177 Gene3D - 19 174 IPR035921 -
Arst4g00166 177 PRINTS Vacuolar ATP synthase 16kDa subunit signature 37 61 IPR000245 GO:0033179|GO:0046961|GO:1902600
Arst4g00166 177 PRINTS Vacuolar ATP synthase 16kDa subunit signature 146 169 IPR000245 GO:0033179|GO:0046961|GO:1902600
Arst4g00166 177 PRINTS Vacuolar ATP synthase 16kDa subunit signature 63 87 IPR000245 GO:0033179|GO:0046961|GO:1902600
Arst4g00166 177 PRINTS Vacuolar ATP synthase 16kDa subunit signature 119 145 IPR000245 GO:0033179|GO:0046961|GO:1902600
Arst4g00166 177 SUPERFAMILY F1F0 ATP synthase subunit C 101 168 IPR035921 -
Arst4g00166 177 SUPERFAMILY F1F0 ATP synthase subunit C 17 86 IPR035921 -
Arst4g00166 177 CDD ATP-synt_Vo_c_ATP6F_rpt2 103 167 - -
Arst4g00166 177 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 171 - -
Arst4g00166 177 CDD ATP-synt_Vo_c_ATP6F_rpt1 21 83 - -
Arst4g00166 177 Pfam ATP synthase subunit C 24 83 IPR002379 GO:0015078|GO:0033177|GO:1902600
Arst4g00166 177 Pfam ATP synthase subunit C 108 167 IPR002379 GO:0015078|GO:0033177|GO:1902600
Arst4g00166 177 FunFam V-type proton ATPase proteolipid subunit 19 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00166 Arst-Chr4 1274682 1277098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00166 6 176 Primary Pumps ATPases(2) AT2G25610 94.152 5.88e-111 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00166 K03661 - gmx:100527177 310.071