LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g00165	ATGACCGTCGAGAACTACCACGTCATCGAGCTCGTCGGCGAGGGTTCCTTCGGGAAAGTCTATAAAGGGAGGCGCAAACATTCCGGTCAGACTGTTGCGATGAAGTTCATAATGAAGCACGGTAAAACCGAAAATGATATTCACAACCTCAGGCAAGAAATCGAGATCTTAAGAAAGTTGAAGCATGAAAACATTATCCAGATGCTTGATTCATTTGAAAGTCCACAAGAGTTTTGTGTTGTCACAGAATTTGCTCAAGGGGAGCTATTTGAGATTCTCGAGGATGATAAGTGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAACAACTGGTAAAAGCGTTACATTATTTGCATTCCAACCGAATCATCCATCGTGATATGAAGCCGCAGAATATTCTTATTGGTGCTGGATCTGTTGTCAAGCTATGCGATTTTGGTTTTGCACGAGCAATGTCCACAAATACAGTTGTCTTGCGATCCATAAAAGGAACTCCTCTATACATGGCTCCAGAGCTTGTACGGGAACAACCTTACACCCACACTGTTGATTTATGGTCTCTCGGTGTTATATTATATGAGTTGTATGTTGGCCAACCTCCTTTTTACACAAATTCTGTGTATGCTCTCATCAGACACATTGTCAAGGATCCAGTTAAATATCCAGAGAGCATGAGTCCCAGTTTCAAAAGCTTTTTGAAGGGCCTGCTAAACAAGGCACCTGAAAGTCGTTTAACTTGGCCTGCACTTCTTGAACACCCATTTGTTAAAGAGACTTCTGATGAACTTGAAGACAGGGCATTGTGTGAGATTACCGGCTCACCTGGGGACTGTGATGCTGCAAGGAGGACCATTCAAAATTCAACAGGTTGTAACTATCCCAAGTCTGGTTTGTTGGAGCATAATTCTTCTCCACATGAGAATAAAGCTCTGTTAAAGAGCCCTAAACCAGAGAAGGAGAATTCATTAGTTCCTGATGAGTCCCCTGGAATCTCAAATCAATCTGCTATAACAGAGTCAGGTTGCCAAAGATTGGATCAACTTGAAAATAACTCTCGAACAGTCAAAGGTGCAAAAATAATTGGTCAAGATAGTGAAGCTTTGGGGCATATTCTTCTACCACTTAAAAAGTGGTCAAATGGATCTCAAAATATTTGCAGTGATCAAGTACTCATTGAGGCAAACCAATCACTAAGGATTGTTTCAAATCTTGTTGCGGCTGGTGTGCTAAGTCTTAATGGGAAAATGGATGAACTTATAACTGAAATTCTTCTATTCATTGGGTCTGTTCTAAGCGTGAAATCCTCTGAACTCATAGACTTGATAGCAAAGGGTTTCTCCATCACAAAAGTTTTGCTAGAAAACTATGGGGCTTGCACTTCAAGTTCTTACTTCAGGCACTGGGTTGCAATTGTTGAAATTTATTCTCAGATTGTAACTTCAAGCAGTGAAGCATCTGGAAGGGTACTGTCTGAGTCTAGTGCCTGCATTACAGTCATGCTATCTAGAGTTGTTAAGGTGCTTAGATCATCTCAAATTTTGGATCCAGATACACATAATGAAACTGTTGGTAGAGTTTTAGAACATGCTAAAACATCTGGTCTAGTAGACAATTTGTGTCTGTGCTTAGCCACTTCAGGTTCGAGTCTCATCTCAGGCTCTTCGAATATGCTACGGGCTGCTACTGAAGCATGCAGGGCTGTCTGGTCTTTTATTAATGCACTGGATATATACTTTATGAAAAAGAGTTCCCCTTTGTTTCCCATAAACGCTTTGTGGAATCATTCGTTGAATAGGAAGCAAATTATGGATCATGGGCAAAGTCCCTTGGCTGTTACAGATACAGCCCAAATTGTTGATGCAGTAACGAGAGCATACTTGAGATCTAAAGCTGTACAAGTTGCTGTTTACTATTGTTTTCACCAGCGTATTGAGTCTGCCATGAATTGTAGTCTCCAGCTTTTGTCAAGGTGCTGCATACACAGCGGCACTGTTGCAGCTCTCCTTTGTGGTCTACCTACTACCCTTCCGGTGACTACTCTTGTTAGTGGTGGTGGTGATGGTACTATTATTTCAGAGATATTTTCTGTTTTGTCGTTATGTATTAACTCTGCTAACAAAGATGCACAGAGTGGGGAACCGAATAATGTTCAGTGTAAATTATCATATCCCTCTGCTTTGGTTCGTCATTCATGTCTCACTCTTGCAATAATTGCACAATGCTTGAAGTCAACTGGACGAAATTCAGCAATTTTTATGCTGACTACCTCACATAAGAAGCAGTTTGCTAGACTATCATGTCTAGCCCATCATATGTCTTCAGACGACAAGACAAAAGCTTCTCAAACTGCATCAGCATTTTTGGCTCTGGCGTCCATTTTATTTCTTGAATCTGGGGCTTCAGTTGAGTCTCAAATAGCTGACATTGCTATGCCTTTAATCCCTCGAACTTTTGCTCTGTGTGACCATCTTAAAATTTCATCTTGCAAAAAGAATGACAATGAATTGGATCCTGACTACCTAAGTGGGAAGCTTTCATATTGGCAAGGGGTAAGAGATGGATTTGTTGGTCTATTAGATTCCAGACTGAAATGGGGAGGACCATTAGCTGTTCAGCAGTTTTGTGCAAGTGGTATCCCTCTTCTTCTTATTGGCTTATTAGGCATTGATGTTTTAAACGAGGCACATGGAAATGAGTGCCTGAATGATAGAGTTGGATTATCTCCAGTTGGGGTTGTATGGACTATTTCTTCGATCTCTCACTGTCTTTCAGGCAGTGCTTTGACTTTTCGCCATATTTTAATTAGAATTGAACACATTAAGCTCATCACCAGCTTGATATGTGATGTTCATATTAAGTTAGTAAAAGGTTGGATTGGACCTGGTGGAGGACGAGCAGGAGTAAGAGAACTAATAAATGCAGTAGTAGATCTCTTAGCATTTCCTTTTGTTGTGCTGCAAAATGCCCCTGGCCTGCCATCATCAGCCACTGCTTCTGTGAACAGTGGGTTTCTACTCAACATTGGTTCACCTGGTCAGAGAGTCTGCTTGGAGGACAAGGATATGGTTAAGGCCATACAAGAAGACATGAACAAATACATTAAGATCCTTGTGGAGGTGGGTGTGCCTGTTATTATCCTTCGATGCCTAGATCATATGGAGTTGGCTGACTTGGGCAGACCTGTTGCCTTCCTTGCCAAAATGGTATTCCACCGGCCTTTAGCAATTCAACTTGTGAGTAAAGGACTTTTGGAACCAAACAGGATGAGAAGGTTATTTGATTGTTCCGGCCCAAAAGAAGTTACACTGGACACACTAATGATAGTTTCTGATCTTGCTCGCATGGACAAGAGATTCTATGAGTGTATCCAAGGTGCTTCTATTTTGGAGTTCTTAAAAGATTTTCTTTCACATGAAGATCCCAATTTCCGTGCCAAAGCTTGTTGTGCTCTTGGAAATATGTGTCGTCATAGCGCCTATTTTTACAGTTCATTTGCAAGGCACCAAATTGTTGGCCTCCTGATCGATAGGTGCTCTGATCCTGACAAAAGGACACGAAAGTTTGCTTGCTTTGCAATTGGAAATGCGGCTTACCACGATGATACATTGTATGAAGAGCTGAGAAGATCTATTCCTCAGTTGGCTAATGTACTGCAGATGGCAGAGGACGATAAGACTAAGGTAAATGCAGCAGGTGCACTCAGCAATTTGGTTCGACACTCTGACAAGCTTTGTGAAGAAATAGTGTCCAAAGGAGCGATTCAGGTGAAGTGCTTGCTGCAGTTTATTACTGTTTCTAAATTTTTGTGA	3810	0.4136	MTVENYHVIELVGEGSFGKVYKGRRKHSGQTVAMKFIMKHGKTENDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYTHTVDLWSLGVILYELYVGQPPFYTNSVYALIRHIVKDPVKYPESMSPSFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDELEDRALCEITGSPGDCDAARRTIQNSTGCNYPKSGLLEHNSSPHENKALLKSPKPEKENSLVPDESPGISNQSAITESGCQRLDQLENNSRTVKGAKIIGQDSEALGHILLPLKKWSNGSQNICSDQVLIEANQSLRIVSNLVAAGVLSLNGKMDELITEILLFIGSVLSVKSSELIDLIAKGFSITKVLLENYGACTSSSYFRHWVAIVEIYSQIVTSSSEASGRVLSESSACITVMLSRVVKVLRSSQILDPDTHNETVGRVLEHAKTSGLVDNLCLCLATSGSSLISGSSNMLRAATEACRAVWSFINALDIYFMKKSSPLFPINALWNHSLNRKQIMDHGQSPLAVTDTAQIVDAVTRAYLRSKAVQVAVYYCFHQRIESAMNCSLQLLSRCCIHSGTVAALLCGLPTTLPVTTLVSGGGDGTIISEIFSVLSLCINSANKDAQSGEPNNVQCKLSYPSALVRHSCLTLAIIAQCLKSTGRNSAIFMLTTSHKKQFARLSCLAHHMSSDDKTKASQTASAFLALASILFLESGASVESQIADIAMPLIPRTFALCDHLKISSCKKNDNELDPDYLSGKLSYWQGVRDGFVGLLDSRLKWGGPLAVQQFCASGIPLLLIGLLGIDVLNEAHGNECLNDRVGLSPVGVVWTISSISHCLSGSALTFRHILIRIEHIKLITSLICDVHIKLVKGWIGPGGGRAGVRELINAVVDLLAFPFVVLQNAPGLPSSATASVNSGFLLNIGSPGQRVCLEDKDMVKAIQEDMNKYIKILVEVGVPVIILRCLDHMELADLGRPVAFLAKMVFHRPLAIQLVSKGLLEPNRMRRLFDCSGPKEVTLDTLMIVSDLARMDKRFYECIQGASILEFLKDFLSHEDPNFRAKACCALGNMCRHSAYFYSSFARHQIVGLLIDRCSDPDKRTRKFACFAIGNAAYHDDTLYEELRRSIPQLANVLQMAEDDKTKVNAAGALSNLVRHSDKLCEEIVSKGAIQVKCLLQFITVSKFL	1269

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g00165	1269	MobiDBLite	consensus disorder prediction	296	335	-	-
	Arst4g00165	1269	PANTHER	PROTEIN KINASE RELATED	3	1255	-	-
	Arst4g00165	1269	PANTHER	PROTEIN KINASE RELATED	3	1255	-	-
	Arst4g00165	1269	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	123	135	IPR008271	GO:0004672\|GO:0006468
	Arst4g00165	1269	FunFam	Serine/threonine-protein kinase 36	3	316	-	-
	Arst4g00165	1269	Pfam	Protein kinase domain	6	256	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g00165	1269	Coils	Coil	1204	1224	-	-
	Arst4g00165	1269	ProSiteProfiles	Protein kinase domain profile.	6	256	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g00165	1269	FunFam	Aurora kinase A	1	88	-	-
	Arst4g00165	1269	SMART	arm_5	1114	1156	IPR000225	GO:0005515
	Arst4g00165	1269	SMART	arm_5	1200	1239	IPR000225	GO:0005515
	Arst4g00165	1269	SUPERFAMILY	ARM repeat	1029	1255	IPR016024	-
	Arst4g00165	1269	SUPERFAMILY	Protein kinase-like (PK-like)	3	257	IPR011009	-
	Arst4g00165	1269	SMART	serkin_6	6	256	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g00165	1269	Coils	Coil	40	60	-	-
	Arst4g00165	1269	CDD	STKc_STK36	4	256	-	-
	Arst4g00165	1269	Gene3D	Transferase(Phosphotransferase) domain 1	1	293	-	-
	Arst4g00165	1269	ProSitePatterns	Protein kinases ATP-binding region signature.	12	39	IPR017441	GO:0005524
	Arst4g00165	1269	Gene3D	-	1067	1266	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g00165	Arst-Chr4	1249473	1262381	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g00165	3	245	AGC Kinase Gene Family	AT3G08720	38.367	8.05e-45	167

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	ULK_Fused	Arst4g00165		Pkinase	1.1e-78	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g00165	K06228		-	gmx:100792102	1910.58