Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00148 ATGGCGTCGTTCTTCTCGAAGCTGGCGTTGATTCTCTCGTTCTTTCTGCTTTTCTTCCTCTTTCCTGCTCAATCCGCGGTGTTCAGCGTAGATCTGGGGTCCGAATCGCTCAAAGTTGCTGTCGTGAACTTGAAACCTGGTCAGACACCGATCTCTATCGCCATCAACGAGATGTCGAAGCGCAAATCACCGGCGCTGGTTTCCTTCAACTCCGGCAACCGTCTCCTTGCCGAAGAAGCCGCAGGCCTCACCGCTCGCTATCCGCAGGACGTGTACTCTCAAATCAGGGACCTCATAGGGAAACCCTACGGCTTCGCCAAGAAGTTTCTGGATTCAATGTACCTCCCTTTCGAGGTGAAGGAGGATTCCAGAGGCACAGTGAGCTTCGTGGTGGAAGGCGATGGTGGCGCCACTCAGTATTCCGCGGAGGAATTGGTGGCTATGGTGCTGGGCTATGCGGTGCATTTGGCGGAGTTCCACTCCAAGGTTCCGATCAAAGACGCCGTGATATCGGTGCCGCCTTATTTCGGGCAGGCTGAGAGGAAAGGGGTGCTTCAGGCGGCTCAGTTGGCGGGGATTAATGTTCTCTCGCTGATAAATGAGCATTCTGGCGCTGCGTTGCAGTATGGAATTGACAAAGACTTTTCCAATGAGTCCAGGCATGTTGTTTTTTATGACATGGGTTCTGGCAGTACCTATGCTGCACTTGTGTATTTCTCAGCGTACAAGAGCAAAGAGTATGGGAAGACTGTGTCTGTGAACCAGTTTCAGGTTAAGGACGTACGCTGGAACGCAGAGCTGGGTGGCCAGAATATGGAACTACGGTTGGTGGAGCATTTTGCAGATGAGTTCAATAAACAAGTTGGTGGTGGAATAGATGTGAGGAAATTTCCCAAGGCTATGGCAAAATTGAAGAAGCAGGTTAAGCGAACAAAAGAAATTCTTAGTGCAAACACAGCAGCTCCTATTTCAGTTGAATCACTTCATAATGATATAGACTTCAGGAGCTCAATAACCCGTGAGAAGTTTGAAGAGCTTTGTGATGATATTTGGGAACAATCTCTTCTGCCAGTGAAAGAGGTGATTGAGCATTCTGGCTTGTCAATGGACCAGATATATGCGGTGGAGTTGATTGGAGGTGCTACCAGAGTGCCAAAGCTACAGGCTAAGCTTCAAGAGTTCCTTGGGAGAAAACAACTTGATAGGCATCTTGATGCTGATGAAGCTATTGTTCTTGGTGCAGCGTTGCACGCTGCAAATTTAAGTGATGGAATTAAATTGAACCGCAAGCTAGGAATGATTGATGGTTCTTTGTATGGATTTGTGGTTGAGTTGGATGGTCCTGATCTTCTGAAGGATGAAAGCTCGAGGCAGTTACTAGTACCACGAATGAAGAAACTACCGAGCAAGATGTTCAGATCCGTTAGTCACAACAAGGATTTTGAAGTGTTGCTAGCTTATGAAAGTGAAAATCATTTACCACCGGGTGTCACTTCTCCTGAAATTGCAAAATACCAGATTTCTGGTTTGACAGATGCAAGTGAGAAATACTCATCTCGAAACCTGTCGTCCCCTATCAAGGCAATTATACATTTCTCTCTAAGCAGAAGTGGAATTCTCTCTCTTGATCGGGCTGATGCTGTTATCGAAATAACAGAATGGGTGGAAGTTCCCAAAAAGACCCTGACCGTAGAGAACTCGACTATTTCATCGAACCTATCAACTGAAGCTGGTGCTAACAACAATTCCACAGAAAGCAGTGAAAAAATGGAAACTGAAGTGGGGGTAATACAAAAGCTTAAAAAGAAGACCTTTAGGGTACCATTAAAGATCGTTGAGAAAGAGCCTGGATTGTCTCTGTCTAAAGATTTTCTTGCCGAAGCCAAAGGAAAATTGGAAGCACTAGACAAAAAGGATGCCGAAAGAAAAAGAACGGCTGAGTTAAAAAATAATTTAGAAGGTTATATATATACCACTAAGGAAAAGATTGAAACTGTTGAAGAGTTTGAAAAAGTTTCTACAAGTGAGGAACGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTGTACACAGATGGTGAAGATGCCAATGCTACTGAGTTTCAAGAACGTCTAGATATGTTGAAAGCTGTTGGTGATCCAGTTTTCTTTAGGTTAAAAGAGCTTACAGCTCGACCAGCTGCTATTGAACATGCCCAGAAATATCTCGAGGAGCTGAAGCAGATTGTTCAAGAGTGGAAGGTAAACAAGTCTTGGCTTCCAAAAGAACGAGTAGATGCGATTCTAGATGATGCTGAAAAGTTAAAGAAGTGGTTGGACGAAAAAGAGACTGAACAACAGAAGATTTCTGGATTCAGTACACCAGCTTTTACTTCTGAAGAAGTACTTTTGAAGGTGTTTGATCTTCAAAACAAGGTTGCCAGTGTTAATAAAATTCCCAAGCCTAAGCCTAAAATTCAGAAACCTGTGAAGAATGAAACTGAGAGCAAAGTGCAGGAGGATTCGGGTAATTCTAACTCCACCTCAACTGCCGGTGATCAATCCGGTGACAGTTCAGAAGGCACAAGTGAAGAATTTGCTGACAATCAAGAAGGTCCAAGTGATGAAAAGAATGATGAGCAAACAGAAGTTCATGATGAGTTATGA 2655 0.4433 MASFFSKLALILSFFLLFFLFPAQSAVFSVDLGSESLKVAVVNLKPGQTPISIAINEMSKRKSPALVSFNSGNRLLAEEAAGLTARYPQDVYSQIRDLIGKPYGFAKKFLDSMYLPFEVKEDSRGTVSFVVEGDGGATQYSAEELVAMVLGYAVHLAEFHSKVPIKDAVISVPPYFGQAERKGVLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNESRHVVFYDMGSGSTYAALVYFSAYKSKEYGKTVSVNQFQVKDVRWNAELGGQNMELRLVEHFADEFNKQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHNDIDFRSSITREKFEELCDDIWEQSLLPVKEVIEHSGLSMDQIYAVELIGGATRVPKLQAKLQEFLGRKQLDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMIDGSLYGFVVELDGPDLLKDESSRQLLVPRMKKLPSKMFRSVSHNKDFEVLLAYESENHLPPGVTSPEIAKYQISGLTDASEKYSSRNLSSPIKAIIHFSLSRSGILSLDRADAVIEITEWVEVPKKTLTVENSTISSNLSTEAGANNNSTESSEKMETDXVGVIQKLKKKTFRVPLKIVEKEPGLSLSKDFLAEAKGKLEALDKKDAERKRTAELKNNLEGYIYTTKEKIETVEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLDMLKAVGDPVFFRLKELTARPAAIEHAQKYLEELKQIVQEWKVNKSWLPKERVDAILDDAEKLKKWLDEKETEQQKISGFSTPAFTSEEVLLKVFDLQNKVASVNKIPKPKPKIQKPVKNETESKVQEDSGNSNSTSTAGDQSGDSSEGTSEEFADNQEGPSDEKNDEQTEVHDEL 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00148 885 Gene3D - 214 401 - -
Arst4g00148 885 Coils Coil 733 753 - -
Arst4g00148 885 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 429 573 IPR029047 -
Arst4g00148 885 SUPERFAMILY Actin-like ATPase domain 27 213 IPR043129 -
Arst4g00148 885 MobiDBLite consensus disorder prediction 816 885 - -
Arst4g00148 885 Gene3D - 93 148 - -
Arst4g00148 885 Gene3D Actin; Chain A, domain 4 268 353 - -
Arst4g00148 885 CDD HYOU1-like_NBD 29 419 - -
Arst4g00148 885 PRINTS 70kDa heat shock protein signature 26 39 - -
Arst4g00148 885 PRINTS 70kDa heat shock protein signature 168 188 - -
Arst4g00148 885 PRINTS 70kDa heat shock protein signature 404 424 - -
Arst4g00148 885 PRINTS 70kDa heat shock protein signature 58 70 - -
Arst4g00148 885 PRINTS 70kDa heat shock protein signature 372 388 - -
Arst4g00148 885 MobiDBLite consensus disorder prediction 836 865 - -
Arst4g00148 885 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 648 730 IPR029048 -
Arst4g00148 885 MobiDBLite consensus disorder prediction 867 885 - -
Arst4g00148 885 ProSitePatterns Heat shock hsp70 proteins family signature 3. 375 389 IPR018181 -
Arst4g00148 885 FunFam Heat shock 70 kDa protein 4 621 733 - -
Arst4g00148 885 PANTHER HSC70CB, ISOFORM G-RELATED 25 861 - -
Arst4g00148 885 FunFam Heat shock 70 kDa protein 4 268 353 - -
Arst4g00148 885 Gene3D - 30 419 - -
Arst4g00148 885 Pfam Hsp70 protein 28 720 IPR013126 GO:0005524|GO:0140662
Arst4g00148 885 Gene3D - 621 735 IPR029048 -
Arst4g00148 885 SUPERFAMILY Actin-like ATPase domain 219 421 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00148 Arst-Chr4 978783 989497 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00148 23 723 Calmodulin-binding Proteins AT3G12580 26.227 3.82e-66 232