Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00136 ATGAAAGCCATGAAGAATTGGTTGAGGCAGATTCTTCGAGGATTATGCTATCTGCATGGCCATAATCCGCCCATAATTCATAGGGATCTGAAATGTGATAACATCTTCGTCAACGGTAATACTGGACGTGTTAAGATTGGAGATCTTGGATTGGCAGTTGTGATGCAGCAGCCTCTTGCTCAGAGTGTTATAGGCACGCCTGAATTTATGGCACCGGAACTTTATGAAGAACAATATAATGAACTTGTTGACATATATTCTTTTGGCATGTGTGTGTTGGAAATGGTCACCTGTGAATACCCATATAGTGAATGTAGAAATCCGGCACAGATATATAAGAAAGTTACTTCTGGTATAAAGCCTGCCGCTCTGGCTAAAGTACATGATTTGAAATTGAGAGAATTTATTGAGAAGTGTCTAGTTCCAGCAGCTATGCGACTGCCGGCGTCTGAACTGTTGAAAGACCCATTCCTTGTTGCTGAAAGCCCGAAGGAGATCAATCATGATACACTACTGCAGCTGACTAATCCGCCAATATCTGAGCCTTGTCCTATGGAGACAGACTCAAGCTCCAGGCATACTTCACATGGTTCCTCTGTGAGTAGTATTGAAGAAACTTCCTTAGTTTCAGTGTTCGATCTTCTGCAGGTGACTCAGAAAAACGAATTCCGGTTAAGAGGGGAGAAAACTGCCACCAGTACAATTTCACTTACCCTGCGAATTGCCGATGCATGCGGTCGAGCAAGGAATATCCATTTTCCGTTTTATACCCATTCTGACACGGCCAATTCAATTGCTGTGGAGATGGTTGAGCACCTGGAACTTGCGAAGGAGGATGTAACTGTGATTGCTGAGCTAATACAAAACATGATTCTGAAGCTCATGCCCAACTGGAAACCTTCCTCTCATTCCTCTCTCAACTTGTCATCTGAAAAAGATCACTTGTACAAGCCTTCGGAAGAACTTCGGAGCTGTGGAACATCAAGTTGCCAGTGGCCATCACTATCAAGTGTTTTTGATACAAAAGCAATTCAAGATGATTCTGTTCGCTTACATCATGATGGAGAAAATCATTATATACAAGAATCTGTTATGTCAGAGATTTCATCAGAGTATGGGACTACATTTGCTTTAGATTCGAAGAGTGAAGAGCATGATAGCTTTAGTATGGACGGATGCTGCAAAGGTTCCAATGGCTTAAATACCAATTCAGATGCCGGGTTCTGTGCTCAAGATGATAATGAACAATCAGAGAAATCAGCAGGCGTTATCAATTCACAATGCAGTGCATTCGAAAACTTTGACGTGTCAAGTATATGTTCTGTTGCTCTAGCCGGCATAGATAATTCAAACGAGCTACAGCTGGAGCTTGATGCAATAGAAACGCAGTATCACCAATGTTTTCGTGAGCTCGTGAAGATGAGGGAGGACGCCATAGAAAACGCCAAAAGGATGGATTACAAGGAAGAAAATATCAGTTATGTGATGCACTAA 1494 0.4217 MKAMKNWLRQILRGLCYLHGHNPPIIHRDLKCDNIFVNGNTGRVKIGDLGLAVVMQQPLAQSVIGTPEFMAPELYEEQYNELVDIYSFGMCVLEMVTCEYPYSECRNPAQIYKKVTSGIKPAALAKVHDLKLREFIEKCLVPAAMRLPASELLKDPFLVAESPKEINHDTLLQLTNPPISEPCPMETDSSSRHTSHGSSVSSIEETSLVSVFDLLQVTQKNEFRLRGEKTATSTISLTLRIADACGRARNIHFPFYTHSDTANSIAVEMVEHLELAKEDVTVIAELIQNMILKLMPNWKPSSHSSLNLSSEKDHLYKPSEELRSCGTSSCQWPSLSSVFDTKAIQDDSVRLHHDGENHYIQESVMSEISSEYGTTFALDSKSEEHDSFSMDGCCKGSNGLNTNSDAGFCAQDDNEQSEKSAGVINSQCSAFENFDVSSICSVALAGIDNSNELQLELDAIETQYHQCFRELVKMREDAIENAKRRXDYKEENISYVMH 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00136 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Arst4g00136 498 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 235 291 IPR024678 GO:0004674|GO:0005524
Arst4g00136 498 Gene3D - 233 323 - -
Arst4g00136 498 MobiDBLite consensus disorder prediction 177 199 - -
Arst4g00136 498 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00136 498 FunFam probable serine/threonine-protein kinase WNK9 1 163 - -
Arst4g00136 498 Pfam Protein kinase domain 2 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00136 498 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00136 498 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 423 - -
Arst4g00136 498 Gene3D Transferase(Phosphotransferase) domain 1 1 164 - -
Arst4g00136 498 SUPERFAMILY Protein kinase-like (PK-like) 4 158 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00136 Arst-Chr4 874993 877558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00136 2 485 MAP Kinase Kinase Kinase AT5G41990 45.492 4.65e-124 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Arst4g00136 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00136 K08867 - gmx:100783717 594.349