Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00101 ATGTTCACGGATGCAATAGGGAATGCAGGGTACTCTCTGCTGAAGGATTTAAGAGCTGAAATTGAAGTGAAGGATGGAATTTTTTCTCTCTGCTTTTGGGTTTATTTGGCCAACTCAACTACATTTCCTGCTACCATTATTCAGCAGGTTTGCTCTGATGTTTCTGAAAGTGCTCCTTTCCTTGTTATAAATGATCACAAGAGAATTAATCTTCTACCGCTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATCAATTCCTTGACGGAAGTTGCATATGCAACTGTAGATTTTGAGTTTCCATTGCAAAATTGGGTTCACATTGGATGTGAGGTTTGCCCTAATCACATGAAACTACAGATTAATGGAGAGATTGTTGGAGAAAAACCGCTGTCATCAAATAAGGAACCCAGTTCAAATGATTTGAGGAAAATAGTTTTGGCAAATATTGGTGGAGATGGAAATATTTCACACGGTTATGTGTACAATTTTCAAGTTTTCCCTTCTGTTTCATCTATTAAAGATCACCATATGAAGGATCCTCCTCTAAAGTTATCTATTGATGAGTCATCTGCCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTACTATTAGATGTTTTTGGCCAACCTGTTGATAAGGAGAATGAGGTTTATGCTTCACTTTTGTATGCTGACACGCGGGCACCAGTGGAGAATACAATTGATGAAGAAGCACCCATTTTGGCTAGCTATGATGGAATTGAATTTCCTTCTTATGAAAGACCGAGTAAACTTTTACTGGGCCGTGCATCTTTTAAGCTGAAGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAAATTCTGTGTTCCAAAATTAGGAAATTATCCTTTTTTTGAGGCACTCTCCCGTCCAATTCGATGCATCTCCAGGAGTCGTAATACCCGATTGTCTACCCTGGTGTGGAAAAGGTCACCTGGTCTTGCTAAGCATAATTTAATGCAATCTTCAGGAATGGATGATGCATCCTTTGAACATCAGCATCCTGTTTGTGAGGCAAAATCTAATCCATTAACGAAGCGATTCAGATTTGGACATGACAAGATATCTGTATCAGTGAAGGCTGACACCAACGTAGAGCAACCTGACGAGGAATGTAATTCTCATGCCCGGACTACTAATCAGGTTGAGAATGGGCTTACAACTGGCTTGTATGGCACACCTGCTAACTACGAGGCATATGAGACTCTGTCTGATTCAGAGAGTATAGGGGAGAGAAATTCACCTTCAAATAATGTGGCAAGTAGAAGATATCCAATATCTGACATGACTGTTTTTAAGTACTGCTTGGCTGGCTTGGCTGAGAGATCGCTGATGCTTAAGGAGATTGCATCCTTGGCCTCAAAGAAAGAAATTTCAGAGTTGGCCCATCATGTGTCACTTTATTCAGGATGTTCACACCATGGAAATCAAATATTAATTGCCAAAAAATTGGTGGAAGATGGAACTAATCTTTGGAAGGTGATGTCTCCAAACAACAACCACGTTCCTTGGGAGAGTGCAGTATATGAGATTGAAGAGCAATTCATGAAGATTGCTTCTTGCAGTTCGCGATCTCTCTCACATCAGGACCTAGAGCTTCTAAGAGTTATTGCTGGATGTCAAGAGTATTTAGCCCAAGAAAACTTTGAGAAGTTATGGTGCTGGTTGTACCCTGTGGCTTACATAATTTCAAAGGAGCGGATAAACCCTATCTGGAATTCTACATCACCTAAGTGGATAGAAGGATTCATAACTAAGGAGGAAGCAGAAGCTTCGCTTCAAGGTCCCACAGGACTTCAAGAACCAGGTACATTTGTATTGAGATTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCAGGTAGCCTAATTGTCACATATGTTGGCAATGATTACAAACTTCACCACAGGCTACTTTCGGTGGATCGTGTTTTTGGCTCTGGTGATAAAGGAATCGACATGAAGCCACTCCAAGCTATGCTACTGGAAGAACCTGAGTTGACTCGATTGGGAAGGATAATAAGAGGCCATTAG 2130 0.4127 MFTDAIGNAGYSLLKDLRAEIEVKDGIFSLCFWVYLANSTTFPATIIQQVCSDVSESAPFLVINDHKRINLLPLLLLHEEAPDTGNINSLTEVAYATVDFEFPLQNWVHIGCEVCPNHMKLQINGEIVGEKPLSSNKEPSSNDLRKIVLANIGGDGNISHGYVYNFQVFPSVSSIKDHHMKDPPLKLSIDESSASEIEEESDGVWSIVGGKASCRRNFSLDVVLLDVFGQPVDKENEVYASLLYADTRAPVENTIDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISQLSSKCDNRLFLIKFCVPKLGNYPFFEALSRPIRCISRSRNTRLSTLVWKRSPGLAKHNLMQSSGMDDASFEHQHPVCEAKSNPLTKRFRFGHDKISVSVKADTNVEQPDEECNSHARTTNQVENGLTTGLYGTPANYEAYETLSDSESIGERNSPSNNVASRRYPISDMTVFKYCLAGLAERSLMLKEIASLASKKEISELAHHVSLYSGCSHHGNQILIAKKLVEDGTNLWKVMSPNNNHVPWESAVYEIEEQFMKIASCSSRSLSHQDLELLRVIAGCQEYLAQENFEKLWCWLYPVAYIISKERINPIWNSTSPKWIEGFITKEEAEASLQGPTGLQEPGTFVLRFPTSRSWPHPDAGSLIVTYVGNDYKLHHRLLSVDRVFGSGDKGIDMKPLQAMLLEEPELTRLGRIIRGH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00101 709 Gene3D SH2 domain 596 706 IPR036860 -
Arst4g00101 709 ProSiteProfiles Src homology 2 (SH2) domain profile. 611 709 IPR000980 -
Arst4g00101 709 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 172 IPR013320 -
Arst4g00101 709 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 29 699 IPR001217 GO:0003700|GO:0006355|GO:0007165
Arst4g00101 709 SUPERFAMILY SH2 domain 605 673 IPR036860 -
Arst4g00101 709 CDD SH2_SHA 600 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00101 Arst-Chr4 651985 669555 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Arst4g00101 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00101 - - gmx:100803169 1122.84