Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00100 ATGTTCACGGATGCAATAGGGAATGCAGGGTACTCTCTGCTGAAGGATTTAAGAGCTGAAATTGAAGTGAAGGATGGAATTTTTTCTCTCTGCTTTTGGGTTTATTTGGCCAACTCAACTACATTTCCTGCTACCATTATTCAGCAGGTTTGCTCTGATGTTTCTGAAAGTGCTCCTTTCCTTGTTATAAATGATCACAAGAGAATTAATCTTCTACCGCTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATCAATTCCTTGACGGAAGTTGCATATGCAACTGTAGATTTTGAGTTTCCATTGCAAAATTGGGTTCACATTGGATGTGAGGTTTGCCCTAATCACATGAAACTACAGATTAATGGAGAGATTGTTGGAGAAAAACCGCTGTCATCAAATAAGGAACCCAGTTCAAATGATTTGAGGAAAATAGTTTTGGCAAATATTGGTGGAGATGGAAATATTTCACACGGTTATGTGTACAATTTTCAAGTTTTCCCTTCTGTTTCATCTATTAAAGATCACCATATGAAGGATCCTCCTCTAAAGTTATCTATTGATGAGTCATCTGCCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTACTATTAGATGTTTTTGGCCAACCTGTTGATAAGGAGAATGAGCAGGTTTATGCTTCACTTTTGTATGCTGACACGCGGGCACCAGTGGAGAATACAATTGATGAAGAAGCACCCATTTTGGCTAGCTATGATGGAATTGAATTTCCTTCTTATGAAAGACCGAGTAAACTTTTACTGGGCCGTGCATCTTTTAAGCTGAAGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAAATTCTGTGTTCCAAAATTAGGAAATTATCCTTTTTTTGAGGCACTCTCCCGTCCAATTCGATGCATCTCCAGGAGTCGTAATACCCGATTGTCTACCCTGGTGTGGAAAAGGTCACCTGGTCTTGCTAAGCATAATTTAATGCAATCTTCAGGAATGGATGATGCATCCTTTGAACATCAGCATCCTGTTTGTGAGGCAAAATCTAATCCATTAACGAAGCGATTCAGATTTGGACATGACAAGATATCTGTATCAGTGAAGGCTGACACCAACGTAGAGCAACCTGACGAGGAATGTAATTCTCATGCCCGGACTACTAATCAGGTTGAGAATGGGCTTACAACTGGCTTGTATGGCACACCTGCTAACTACGAGGCATATGAGACTCTGTCTGATTCAGAGAGTATAGGGGAGAGAAATTCACCTTCAAATAATGTGGCAAGTAGAAGATATCCAATATCTGACATGACTGTTTTTAAGTACTGCTTGGCTGGCTTGGCTGAGAGATCGCTGATGCTTAAGGAGATTGCATCCTTGGCCTCAAAGAAAGAAATTTCAGAGTTGGCCCATCATGTGTCACTTTATTCAGGATGTTCACACCATGGAAATCAAATATTAATTGCCAAAAAATTGGTGGAAGATGGAACTAATCTTTGGAAGGTGATGTCTCCAAACAACAACCACGTTCCTTGGGAGAGTGCAGTATATGAGATTGAAGAGCAATTCATGAAGATTGCTTCTTGCAGTTCGCGATCTCTCTCACATCAGGACCTAGAGCTTCTAAGAGTTATTGCTGGATGTCAAGAGTATTTAGCCCAAGAAAACTTTGAGAAGTTATGGTGCTGGTTGTACCCTGTGGCTTACATAATTTCAAAGGAGCGGATAAACCCTATCTGGAATTCTACATCACCTAAGTGGATAGAAGGATTCATAACTAAGGAGGAAGCAGAAGCTTCGCTTCAAGGTCCCACAGGACTTCAAGAACCAGGTACATTTGTATTGAGATTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCAGGTAGCCTAATTGTCACATATGTTGGCAATGATTACAAACTTCACCACAGGCTACTTTCGGTGGATCGTGTTTTTGGCTCTGGTGATAAAGGAATCGACATGAAGCCACTCCAAGCTATGCTACTGGAAGAACCTGAGTTGACTCGATTGGGAAGGATAATAAGAGGCCATTAG 2133 0.413 MFTDAIGNAGYSLLKDLRAEIEVKDGIFSLCFWVYLANSTTFPATIIQQVCSDVSESAPFLVINDHKRINLLPLLLLHEEAPDTGNINSLTEVAYATVDFEFPLQNWVHIGCEVCPNHMKLQINGEIVGEKPLSSNKEPSSNDLRKIVLANIGGDGNISHGYVYNFQVFPSVSSIKDHHMKDPPLKLSIDESSASEIEEESDGVWSIVGGKASCRRNFSLDVVLLDVFGQPVDKENEQVYASLLYADTRAPVENTIDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISQLSSKCDNRLFLIKFCVPKLGNYPFFEALSRPIRCISRSRNTRLSTLVWKRSPGLAKHNLMQSSGMDDASFEHQHPVCEAKSNPLTKRFRFGHDKISVSVKADTNVEQPDEECNSHARTTNQVENGLTTGLYGTPANYEAYETLSDSESIGERNSPSNNVASRRYPISDMTVFKYCLAGLAERSLMLKEIASLASKKEISELAHHVSLYSGCSHHGNQILIAKKLVEDGTNLWKVMSPNNNHVPWESAVYEIEEQFMKIASCSSRSLSHQDLELLRVIAGCQEYLAQENFEKLWCWLYPVAYIISKERINPIWNSTSPKWIEGFITKEEAEASLQGPTGLQEPGTFVLRFPTSRSWPHPDAGSLIVTYVGNDYKLHHRLLSVDRVFGSGDKGIDMKPLQAMLLEEPELTRLGRIIRGH 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00100 710 Gene3D SH2 domain 597 707 IPR036860 -
Arst4g00100 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 172 IPR013320 -
Arst4g00100 710 SUPERFAMILY SH2 domain 606 674 IPR036860 -
Arst4g00100 710 CDD SH2_SHA 601 710 - -
Arst4g00100 710 ProSiteProfiles Src homology 2 (SH2) domain profile. 612 710 IPR000980 -
Arst4g00100 710 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 29 700 IPR001217 GO:0003700|GO:0006355|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00100 Arst-Chr4 651985 669557 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Arst4g00100 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00100 - - gmx:100803169 1118.22