Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00089 ATGGGTTGGAGATGTTGGTGTGTGGTTCTGGTTGTTGTTCTTCTTCAACCCCTCATAGATTCTGCTTCTGCGAGCTCCATTGTTAAGAACCTACCGGGTTATGACGCCCATCTTCCATTCAACCTTGAAACCGGAAACTTGAGCTGAACCCATACTCTTGGACCCATATGTTGAACATGTTATACATAGATATCCCAGTGGGCACTGGATTTTCTTACTCAAAAACGCAACAAGGTTACTATAGTAGTGACACATTATGGGTTGACCATACGTATGCTTTTCTACAAAAGTGGTTTATTGATCATCCAAAGTTCAACTCAAATCCATTTTACGTTGGTGGTGGCTCGTATTCAGGATCTCCTACTGCTCCTCTCGTTCAAAAATTATATGATGGTTACGTAGCAGGTCGTGTACCACGCATTAATATCAAACAGGGTTATGTGATTGCAAGCCCAGCGGTGGATGCATATGAGAGCGAGAACACGAAAGTGTTGTATGCATACCAGATGTCTCTCATACCAGAATTACTCTATCAGTCGATAAAAGAACATTGTGGTGGTAATTATGTAAATATTGATCCAGAAGACACAAAGTGTGTTTCAGATTATGAAGCTTATTCCGAGTTAATTCGTTACATAAATCCACAACAAATTTTGGAACCTTTGTGTGAAACGACACCTGGTATGAATCATGGAATTTTACAATCCTCACTTCAACATCCTTCAGAATTTTGGTGTAGAAGTTATTCTCACATTCTTGTGAACACATGGGCAAATGATCAAAGTGTGAGGAAAGCCTTGTACATTAGAGAGGGAACTAAGGGAGAGTTCTTGAGATGCAACAAGACTTTGGCATATAACGTCACTCTACTCAGCGTTGCAGGATATTATCAAAATTTGACCAAGGCCAACATCCAAGCTCTAGTTTACTGTTCTGATCTTGATATGTCGATACCACACATAGCTACACAAAATTGGATAAAGTCATTAAAGCTTAGCATATATGACAAGTGGCGTGCATGGTTTGTTGATGGTCAAGTGGCCGGATTTACGGAAATTTACAAAATGAAAGAAGACCATTACTTAACATATGTGTCAGTAAAGGGTGCTGGACATGTAGCCCAGACATTTAAACCCAAGGAAGTTTACCATATGATAAAGAGGTGGTTTTCATATTCTCTTATATAA 1187 0.3943 MGWRCWCVVLVVVLLQPLIDSASASSIVKNLPGYDAHLPFNLETGYVGVGEEEAVQLFYLFVESERNPLFDPLLLWFVGGPGCSALSAFFFENGPLRMDRNLSGDIPKLELNPYSWTHMLNMLYIDIPVGTGFSYSKTQQGYYSSDTLWVDHTYAFLQKWFIDHPKFNSNPFYVGGGSYSGSPTAPLVQKLYDGYVAGRVPRINIKQGYVIASPAVDAYESENTKVLYAYQMSLIPELLYQSIKEHCGGNYVNIDPEDTKCVSDYEAYSELIRYINPQQILEPLCETTPGMNHGILQSSLQHPSEFWCRSYSHILVNTWANDQSVRKALYIREGTKGEFLRCNKTLAYNVTLLSVAGYYQNLTKANIQALVYCSDLDMSIPHIATQNWIKSLKLSIYDKWRAWFVDGQVAGFTEIYKMKEDHYLTYVSVKGAGHVAQTFKPKEVYHMIKRWFSYSLI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00089 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 441 IPR001563 GO:0004185|GO:0006508
Arst4g00089 457 Gene3D - 308 455 - -
Arst4g00089 457 FunFam Serine carboxypeptidase-like 19 21 290 - -
Arst4g00089 457 Gene3D alpha/beta hydrolase 21 294 IPR029058 -
Arst4g00089 457 Pfam Serine carboxypeptidase 32 453 IPR001563 GO:0004185|GO:0006508
Arst4g00089 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Arst4g00089 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Arst4g00089 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Arst4g00089 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Arst4g00089 457 SUPERFAMILY alpha/beta-Hydrolases 28 453 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00089 Arst-Chr4 560988 568978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00089 319 453 Calmodulin-binding Proteins AT2G22960 41.481 6.35e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00089 K16296 - cave:132163881 479.174