Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00083 ATGAGTACAATGACGAATAAGTGTGATGGTCGGAAAGTCTCCAAAGTTCGCCGCCCATCCTCATCGGTTGAAGAGGATAGTGGTGAAAGTAACGTTGGAGGAGAAGGTCATTTAAAGAAAGGTCCTTGGACCTCAGCAGAGGATGCAATTTTAGTAGATTATGTCAAGAAGAATGGAGAAGGGAATTGGAATGCAGTTCAAAGGCATTCAGGACTTGCCAGATGCGGAAAAAGTTGTCGTTTACGGTGGGCAAATCATTTGAGACCAGATTTAAGAAAGGGCGCATTCACCGAAGAAGAAGAGCGCCGGATCATTGAGCTTCATGCTAAGATGGGAAACAAATGGGCACGGATGGCTGCAGAGTTGCCTGGGCGTACAGACAATGAGATAAAGAACTATTGGAACACAAGAATTAAAAGAATGCAGCGAGCTGGTCTACCAATCTACCCTCCTGATGTATGCCTGCGGGTGATGCATGGCAATCAAGAAAGTGTAAATGTTGGTACCTTGAGAGATGAAGCCAACCAGCATGATGATCTCTCACAGACAGATACTCTGGATATACCGGAGTTAGATTTCAAACTAGTCAAACTCTGTCCAGGTTTATCTTATGGAACATCAATTTGTGATATACCTGAAAGTAGCATGGTTGAAATGAGTTCGGACTCGTCCCATGGTTACAATCACATGTTTCCTGTGATGCCTCCTTCGAAACGCCTTCGAGAATCAGACATGCAATATGGATATTTGGACAGTTGTATCAGTGATTCTGTCCCAATATTTGAACAGTATGGTGATTACACGTGTGATAAAATTTCCGACCATACTCAATTGTCTTCTCCATGTGATCCTATTCTAAACACCAGCGATCAGTTTCATGGTGATGACACATATGGTAGCCATGCTCCCTTAAATGGCAATACTTCTTCTTCTTCTGTGCCCCTACCCGGGGCCATGAAGTTGGAGCTCCCTTCACTCCAATATTTTGAAACTCAACACGGTATCTGGGGCACACCTGCTTCCCCACTTCCCTCACTTGAGTCCGTTGACACGATGATCCAGTCTCCGCCGGCCAAGCCGTCTCCTTCGGATCCTGTTTCTCCAGAGAGGAGCGGTTTGCTGGAAGCAATAATCTACCAGCCCAAGCAGTTACAAGTGGCCAATAACAATTCACTTCAAGCAACACCCAATGATTGTGTTCGCAAAGAAGTTAAGATTTCAACCATGAAGTGTAAGCCAGAATGCGATGAACAAGGCGGGCCGCATTTCCCCTTAGGTCAGTCTGCTGCTTCAGTTGCAACCAATTATACTACTTCCATTAGCATGTGCTTGGTGGATGCACCCCAATCAGTTGAAACTATTCAGGATCATAATATTAAGCAAGAACTAGGCACACAGTACCCAGCTTACGTGTCTGGGAAGAAAGAAAACTGGAATCAAATAGACTTCACACGGCCCGATGCTTTACTCGACTTGGGTTGGTTTGGGAGTGGCATCGATTGCGACGATTATGATGGCGATCAGTTTCTTTTCAAAGATGCTTTAAGCCCATTTCTTGGTCAAGATCCGGATGGTTAG 1578 0.4499 MSTMTNKCDGRKVSKVRRPSSSVEEDSGESNVGGEGHLKKGPWTSAEDAILVDYVKKNGEGNWNAVQRHSGLARCGKSCRLRWANHLRPDLRKGAFTEEEERRIIELHAKMGNKWARMAAELPGRTDNEIKNYWNTRIKRMQRAGLPIYPPDVCLRVMHGNQESVNVGTLRDEANQHDDLSQTDTLDIPELDFKLVKLCPGLSYGTSICDIPESSMVEMSSDSSHGYNHMFPVMPPSKRLRESDMQYGYLDSCISDSVPIFEQYGDYTCDKISDHTQLSSPCDPILNTSDQFHGDDTYGSHAPLNGNTSSSSVPLPGAMKLELPSLQYFETQHGIWGTPASPLPSLESVDTMIQSPPAKPSPSDPVSPERSGLLEAIIYQPKQLQVANNNSLQATPNDCVRKEVKISTMKCKPECDEQGGPHFPLGQSAASVATNYTTSISMCLVDAPQSVETIQDHNIKQELGTQYPAYVSGKKENWNQIDFTRPDALLDLGWFGSGIDCDDYDGDQFLFKDALSPFLGQDPDG 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00083 525 MobiDBLite consensus disorder prediction 291 315 - -
Arst4g00083 525 CDD SANT 107 136 IPR001005 -
Arst4g00083 525 FunFam Transcription factor GAMYB 95 141 - -
Arst4g00083 525 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Arst4g00083 525 MobiDBLite consensus disorder prediction 346 369 - -
Arst4g00083 525 MobiDBLite consensus disorder prediction 10 24 - -
Arst4g00083 525 SMART sant 92 140 IPR001005 -
Arst4g00083 525 SMART sant 39 89 IPR001005 -
Arst4g00083 525 MobiDBLite consensus disorder prediction 1 41 - -
Arst4g00083 525 MobiDBLite consensus disorder prediction 291 316 - -
Arst4g00083 525 SUPERFAMILY Homeodomain-like 38 134 IPR009057 -
Arst4g00083 525 Gene3D - 95 166 - -
Arst4g00083 525 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 25 495 - -
Arst4g00083 525 FunFam MYB-related transcription factor 39 92 - -
Arst4g00083 525 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Arst4g00083 525 CDD SANT 42 87 IPR001005 -
Arst4g00083 525 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 87 IPR017930 -
Arst4g00083 525 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Arst4g00083 525 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Arst4g00083 525 Gene3D - 39 92 - -
Arst4g00083 525 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00083 Arst-Chr4 535871 542380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00083 35 522 MYB Transcription Factor Family AT5G06100 40.121 2.30e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst4g00083 Myb_DNA-binding 8.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00083 K09422 - gmx:100800658 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00082 4 535871 542383 Arst4g00083 4 535871 542380 PCT