Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00051 ATGGAGGACATAAAAGCGTCATATAGTCTGGGTAAGGAGCTAGGTAGAGGCATGTTTGGGGTAACATATTTATGCACCCACAAGGCAACAGGAAAACAATTTGCATGCAAAACAATTGCGAAGAGGAAGCTAGTGAATAAGGAGGATATAGAGGACGTTAGAAGGGAGGTGCAGATCTTGTACCACCTGTCAGGGCAGCCTAACATCGTAGAGCTGAAAGGTGCCTATGAGGACAAACAATCTGTTCATTTAGTGATGGAATTGTGTGCGGGTGGTGAACTCTTTGATCGTATCATTGCCAAGGGCCACTATACGGAGCGTGCCGCTGCTACCTTGTTAAGAACCATTATGGAGATTGTCCACACTTTTCACTCTCTTGGTGTCATTCATAGAGATCTCAAGCCTGAGAATTTCCTCTTGTTGAGCAAGGACGAAGATGCTCCCCTTAAAGCCACGGATTTTGGTTTATCCGTTTTTTACAAGCAAGGAGATGTTTTCAAAGACATTGTTGGTAGTGCATACTACATTGCACCTGAAGTATTGAAAAGGAAATATGGTCCAGAGGTTGATATATGGAGTGTTGGTGTTATGCTATACATTCTTTTATGTGGAGTTCCTCCATTTTGGGCAGAATCTGAACATGGCATATTCAATGCCATCCTAAGAGGTCACGTTGACTTTTCAAGCGATCCATGGCCTTCAATTTCACCATCAGCAAAAGATCTTGTACGAAAAATGTTGAATTCAGATCCTAAACAAAGGCTTACAGCTTATGAAGTTTTGAATCATCCTTGGGTTAAGGAAGATGGAGAAGCACCAGATAAGCCTATTGATAATGCTGTGCTAAGTAGGCTCAAACAATTCAAAGCAATGAATGAATTCAAGAAAGTTGCTTTAAGGGTTATTGCAGGATGTTTATCAGAAGAAGAAATTATGGGGTTAAAGGAAATGTTTAAGGGAATGGACACTGATAATAGTGGAACCATTACAATTGAAGAACTTAAGCAGGGGCTTGCAAAGCAAGGGACAAAGCTATCAGAACAAGAAGTTCAACAATTACTGGATGCAGCAGATGCTGATGGAAATGGTACCATAGACTATGATGAATTCATCACAGCAACAGTGCACGTGAACAGAATGAACAGAGAAGAACATCTTTATAAAGCCTTCCAATACTTTGATAAAGATAATAGCGGGTAA 1200 0.4067 MEDIKASYSLGKELGRGMFGVTYLCTHKATGKQFACKTIAKRKLVNKEDIEDVRREVQILYHLSGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAATLLRTIMEIVHTFHSLGVIHRDLKPENFLLLSKDEDAPLKATDFGLSVFYKQGDVFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGVPPFWAESEHGIFNAILRGHVDFSSDPWPSISPSAKDLVRKMLNSDPKQRLTAYEVLNHPWVKEDGEAPDKPIDNAVLSRLKQFKAMNEFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVQQLLDAADADGNGTIDYDEFITATVHVNRMNREEHLYKAFQYFDKDNSG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00051 399 ProSiteProfiles Protein kinase domain profile. 8 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00051 399 Pfam EF-hand domain pair 314 374 IPR002048 GO:0005509
Arst4g00051 399 Gene3D - 284 399 - -
Arst4g00051 399 SMART efh_1 313 341 IPR002048 GO:0005509
Arst4g00051 399 SMART efh_1 349 377 IPR002048 GO:0005509
Arst4g00051 399 ProSiteProfiles EF-hand calcium-binding domain profile. 381 399 IPR002048 GO:0005509
Arst4g00051 399 FunFam calcium-dependent protein kinase SK5 303 375 - -
Arst4g00051 399 CDD EFh 314 373 IPR002048 GO:0005509
Arst4g00051 399 CDD STKc_CAMK 8 265 - -
Arst4g00051 399 ProSitePatterns EF-hand calcium-binding domain. 358 370 IPR018247 -
Arst4g00051 399 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 399 - -
Arst4g00051 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Arst4g00051 399 ProSiteProfiles EF-hand calcium-binding domain profile. 345 380 IPR002048 GO:0005509
Arst4g00051 399 FunFam Calcium-dependent protein kinase 1 10 93 - -
Arst4g00051 399 FunFam calcium-dependent protein kinase 1 94 273 - -
Arst4g00051 399 SUPERFAMILY EF-hand 306 399 IPR011992 -
Arst4g00051 399 ProSitePatterns EF-hand calcium-binding domain. 322 334 IPR018247 -
Arst4g00051 399 Gene3D - 307 375 - -
Arst4g00051 399 Gene3D Phosphorylase Kinase; domain 1 10 93 - -
Arst4g00051 399 ProSitePatterns Protein kinases ATP-binding region signature. 14 41 IPR017441 GO:0005524
Arst4g00051 399 Gene3D Transferase(Phosphotransferase) domain 1 94 274 - -
Arst4g00051 399 SMART serkin_6 8 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00051 399 SUPERFAMILY Protein kinase-like (PK-like) 7 271 IPR011009 -
Arst4g00051 399 Pfam Protein kinase domain 8 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g00051 399 ProSiteProfiles EF-hand calcium-binding domain profile. 309 344 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00051 Arst-Chr4 350256 353738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00051 1 399 EF-hand Containing Proteins AT5G12180 88.221 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst4g00051 Pkinase 1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00051 K13412 - gmx:100820422 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g00051 4 350256 353738 Arst7g00713 7 4869238 4871564 PCT