Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00046 ATGGCATTATGCTTGAAGCCACCAAGGCTACACCACAGCAACAATAATGAAGATGACTCTGCAGTCTTCTTGGCGCCACCACCACCAATAAATCAATTCAAAACTGCTTACAAACTTCACGTCAGAAACCTCTCCTATACTCTGCACCAAAACAACACCACTTCCTTCTCATTATGTCAAAAGCCTAAGCCTGTGACAATACTCAAGTCTGTGACTTTTGTTGCAAGGTGTTCGGAGATAGTTGCGGTGGTGGGTCCCAGCGGGACAGGAAAGTCCACTCTTCTCCGGATAATCTCCGGGCGGGTGAAAGAAAAAGATTTCGATCCCAAGAGCATATCGATCAATGAGCAGCCAATGACCATGCCAGCACAATTGAGGAAGCTTTGTGGATTTGTGCCACAAGAGGACAACCTGCTTCCTCTTCTAAGCGTCAAAGAAACTCTTCTCTTCAGCGCCAAGTTCAGACTCAAGGAAATGACACCAAAACAACGAGAATTGCGTGTCGAAAGCTTGATGCAAGACCTAGGCCTTTCCCACGTGGCAGATACTTTCGTTGGAAATGAAGACAACAGAGGTATATCAGGTGGCGAGAGGAAAAGAGTTTCGATTGGGGTTGACATGATTCATGACCCTCCAATCCTGCTCTTAGATGAACCAACATCAGGCCTAGACAGTACTTCGGCATTGCAAGTCATCGAGCTTCTTTCTTCGTTGGTCAAAGCAAAGAAGAGGACAGTGGTTCTGTCAATCCACCAACCCGGTTACAGAATATTGCGCTACATTTCTAGGTTCTTGATCCTCTCCAATGGCTCAGTGGTTCACAACGGTACCCTAGATTCCCTTGAGGAAGCCATTACCAAATTGGGCTTTCAGATTCCCATGCAACTCAATGCTTTGGAATTCTCCATGGAAATCATACGCACCTTACAAGATTATTCCGGTTCCAAAACCACTGAGCTGGAAGAAAACGAGCCATTATTTCCAAACCCCATGTACCCAGTGGAAGGAAACAGCGCTATGATGACATTTTGTTATGCAAACTTGGTTGAGATATGGTTCCTTTGCTCAAGATTCTGGAAGATTATTTATAGGACAAAGCAGTTATTCTTGGCAAGAACAATGCAAGCATTGGTTGGTGGATTTGGGTTAGGAAGTGTTTACATAAAAATAAGGAAGGATGAAGGAGGAGTAGCAGAAAGGTTAGGGTTATTTGCATTTAGCCTTAGTTTTTTGCTGTCTTCAACGGTTGAAGCGCTTCCAATATACCTTCAAGAAAGGCGTGTTGTGATGAAAGAAGCGTCAAGGGGAGCCTATAGAATCTCCAATTACATGATAGCCAACACTTTTGTGTTCCTTCCTTTCTTGTTTCTAGTTTCCATATTATTTGCAGTTCCGGTGTATTGGCTCGTAGGACTCAACCCTTCAATCAGCGCCTTCGGATTCTTCGCTTTAGTCGTGTGGTTCATCGTCCTCATGGCCAGTTCTCTCGTGCTCTTCTTGAGCGCGGTGTCACCTGATTTCATATCCGGCAACTCTCTGATTTGCACAGTCCTGGGAGCTTTCTTCCTCTTCTCTGGATACTTCATTCCCAAGGATAGCATCCCAAAGTATTGGCTTTTCATGTATTATGTGTCACTCTATAGGTACCCTTTGGATGCACTCATCACAAATGAGTACTGGAATAAGAGAAATGAGTGCTTTTCATTCTCATCATCTTCTTCTTATTCCAAGTGCTTGACTACTGGCTTTGATGTGTTGAAGAGTAGAGGGCTTGAAAAGGATGAGAGGTGGATGAACGTGGGAATAATGTTTGGATTCTTTCTCTTTTATCGTCTGCTTTGTTGGCTTATACTTTCACGAAAGGCCTCCAAGTCAATTATATGA 1884 0.439 MALCLKPPRLHHSNNNEDDSAVFLAPPPPINQFKTAYKLHVRNLSYTLHQNNTTSFSLCQKPKPVTILKSVTFVARCSEIVAVVGPSGTGKSTLLRIISGRVKEKDFDPKSISINEQPMTMPAQLRKLCGFVPQEDNLLPLLSVKETLLFSAKFRLKEMTPKQRELRVESLMQDLGLSHVADTFVGNEDNRGISGGERKRVSIGVDMIHDPPILLLDEPTSGLDSTSALQVIELLSSLVKAKKRTVVLSIHQPGYRILRYISRFLILSNGSVVHNGTLDSLEEAITKLGFQIPMQLNALEFSMEIIRTLQDYSGSKTTELEENEPLFPNPMYPVEGNSAMMTFCYANLVEIWFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKIRKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERRVVMKEASRGAYRISNYMIANTFVFLPFLFLVSILFAVPVYWLVGLNPSISAFGFFALVVWFIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKDSIPKYWLFMYYVSLYRYPLDALITNEYWNKRNECFSFSSSSSYSKCLTTGFDVLKSRGLEKDERWMNVGIMFGFFLFYRLLCWLILSRKASKSII 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00046 627 Pfam ABC-2 type transporter 350 559 IPR013525 GO:0016020|GO:0140359
Arst4g00046 627 Gene3D - 39 315 IPR027417 -
Arst4g00046 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 612 - -
Arst4g00046 627 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Arst4g00046 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 294 IPR003439 GO:0005524
Arst4g00046 627 Pfam ABC transporter 68 221 IPR003439 GO:0005524
Arst4g00046 627 SMART AAA_5 77 271 IPR003593 GO:0016887
Arst4g00046 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 285 IPR027417 -
Arst4g00046 627 FunFam ABC transporter G family member 23 59 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00046 Arst-Chr4 313233 315657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00046 56 307 Calmodulin-binding Proteins AT2G36910 32.443 1.37e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00046 K05681 - gmx:100783883 939.488