Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst4g00039 | ATGATATCTGAGATGAGGCCCAGTCAATCTCCACCGCCCAACGCCATCAACAACCATCACCACCACCAAATCAACAACAACAACAACAGCAGGGACCGCCGCCGCCGCAAGGACCTCACCCTGCCGCTTCCGCAGCGGGACACCAACCTCGCCGTGCCCCTCCCACTCCCTCCTACCTCCGCCCCCAGCTCCGGACCTAGCGGCCACCAGATCATCCCCTTCTCCGAGCTGGAGCGCCTGAACCGCATCGGGAGCGGCAGCGGCGGCACCGTCTACAAGGTCCTCCACCGCACGACGAACCGCGTTTATGCCCTGAAGGTGATCTACGGTCACCACGAGGATTCGGTGCGTCGGCAGATCCACCGCGAGATCCAGATCCTCCGGGATGTGGACGATCCGAACGTGGTGAAGTGCCACGACATGTACGACCACAACGGTGAGATCCAGGTGCTTCTGGAGTTCATGGACGAAGGCTCCTTGGAAGGGAAACACATCCCTCAGGAGAATCACCTGGCGGATCTGGCTCGCCAGATCCTGAGGGGGCTGGCCTACCTGCACCGCCGCCACATCGTGCACCGCGACATCAAGCCGTCGAACCTGCTGGTCAACTCACGGAGGCAGGTGAAGATCGCTGACTTTGGCGTTGGGAGGATCCTGAACCAGACGATGGATCCCTGCAACTCGTCGGTGGGGACGATCGCGTACATGTCACCGGAGAGGATCAACACGGACATCAATGACGGACAGTACGACGCCTACGCCGGAGACATATGGAGCCTGGGGGTGAGCATTTTGGAGTTCTACATGGGGAGGTTCCCCTTCGCGGTTGGGAGGCAGGGCGACTGGGCCAGCTTGATGTGCGCGATTTGTATGTCTCAGCCACCAGAGGCGCCGCACACGGCGTCGCCTGATTTTAGGGATTTCGTGTCGCGGTGCCTGCAAAGGGATCCTTCTAGAAGGTGGACTGCTTCGAGGCTGCTCTCACACCCGTTCATTACGCATGGCGTCCAGCAGCAGACTCAGATTTCTCACAATCTCCATCAGCTGCTCCCTCCTCCCCCCAGACCCCTCCCTTCCTAG | 1080 | 0.6056 | MISEMRPSQSPPPNAINNHHHHQINNNNNSRDRRRRKDLTLPLPQRDTNLAVPLPLPPTSAPSSGPSGHQIIPFSELERLNRIGSGSGGTVYKVLHRTTNRVYALKVIYGHHEDSVRRQIHREIQILRDVDDPNVVKCHDMYDHNGEIQVLLEFMDEGSLEGKHIPQENHLADLARQILRGLAYLHRRHIVHRDIKPSNLLVNSRRQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPHTASPDFRDFVSRCLQRDPSRRWTASRLLSHPFITHGVQQQTQISHNLHQLLPPPPRPLPS | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst4g00039 | 359 | ProSitePatterns | Protein kinases ATP-binding region signature. | 83 | 106 | IPR017441 | GO:0005524 | |
| Arst4g00039 | 359 | Pfam | Protein kinase domain | 78 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst4g00039 | 359 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 22 | 342 | - | - | |
| Arst4g00039 | 359 | SMART | serkin_6 | 77 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst4g00039 | 359 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
| Arst4g00039 | 359 | SUPERFAMILY | Protein kinase-like (PK-like) | 74 | 354 | IPR011009 | - | |
| Arst4g00039 | 359 | FunFam | Mitogen-activated protein kinase 2 | 157 | 344 | - | - | |
| Arst4g00039 | 359 | ProSiteProfiles | Protein kinase domain profile. | 77 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Arst4g00039 | 359 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Arst4g00039 | 359 | CDD | PKc_MAPKK_plant_like | 75 | 334 | - | - | |
| Arst4g00039 | 359 | FunFam | Mitogen-activated protein kinase 2 | 59 | 156 | - | - | |
| Arst4g00039 | 359 | MobiDBLite | consensus disorder prediction | 25 | 42 | - | - | |
| Arst4g00039 | 359 | Gene3D | Phosphorylase Kinase; domain 1 | 64 | 156 | - | - | |
| Arst4g00039 | 359 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 190 | 202 | IPR008271 | GO:0004672|GO:0006468 | |
| Arst4g00039 | 359 | Gene3D | Transferase(Phosphotransferase) domain 1 | 158 | 349 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Arst4g00039 | Arst-Chr4 | 264068 | 265691 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst4g00039 | 5 | 348 | MAP Kinase Kinase Gene Family | AT1G51660 | 67.867 | 3.83e-167 | 469 |
Transcription factors information