Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g00038 ATGGCTATTGGCAAAGAAACGATGCAACAACAACACAAGAAGGAGGAGGAGGAATTCATCTTCAAGTCCAGCCTTCCAGACATCTACATCCCCAACCACCTTCCCCTCCATTCCTACATCTTCCAGAACCTTCCGGACTTCGCCACGCGTCCCTGCCTCATCAACGCCCCAACCGGACAAGTTTTCACCTACTCCGACGTCGACCTCAAGGCCAGAAGAGTCGCCTCAGGCCTCCACAAACACGGAATCCGCCAAGGTGACGTCATCATGATCCTGCTCCCAAACTGCCCTCAATTCGTCTTCTCCTTCCTAGGCGCATCGTTCCGCGGCGCCATCGCCACCGCCGCCAACCCGTTCTTCACGGCCGCCGAGATAGCCAAGCAGGCCAAGGCCTCCAACGCCAGGCTGCTGGTAACGCAGTCCAGTTACTACGACAAGGTGAAGGACCTCCACGGCCACCTCAGCCTGGTGTTCGTGGACACTCCCCCGGAGGGGCACCTGCATTTCTCGGAGCTGGAAGAGGCCGACGAGGAAGACATCCCGGAGGTGAAGATCAGCCCGGAGGACGTGGTGGCGCTGCCGTACTCGTCGGGAACAACGGGACTGCCGAAAGGTGTGATGCTGAGTCACAGGGGGTTGGTGACGAGCGTGGGGCAGCAAGTGGACGGAGAGAACCCAAACCTTTACTATCACAGCGAGGATGTGATCATGTGCGTGCTCCCCATGTTCCACATATACTCCCTCAACTCCGTCCTGCTCTGCGGCCTCAGGGCCAAGGCTGCCATCGTCTTGATGCCCAAATTCGAGATCACTGCCTTCCTCGCCTTGGTGCAGAAGCATCGGGTCACCATATGCCCCGTCGTGCCTCCCATCATTCTCGCCATTGCAAAGTGCCCGGATCTCCACAACTACGACCTTTCTTCCATCCGAGTCCTTAAATCCGGCGGCGCTCCCCTCGCCAAGGACCTTGAAGACACCGTCCGCCTCAAATTCCCCAACGCCAAGCTTGGGCAGGGATATGGGATGACAGAGGCTGGTCCAGTGTTAACGATGTGCTTAACATTCGCCAAAGAAGCCATAGATGGAAAACCAGGTGCATGTGGCACCGTCGTCAGAAACGCTGAGTTGAAGATTGTTGATCCTGAAACCGAAAAATCTCTCCCGAGAAATCAACCGGGTGAAATTTGTATTAGGGGCCACCAGATCATGAAAGGTTATCTAAACGATCCAGAGGCAACAGAGAGAACAATTGACAAGGAAGGGTGGTTGCACACGGGTGACATTTCTGATGTTGCTGTTGTCCCGATGAAAGATGAAGCGGCCGGTGAGGTGCCAGTTGCATTTGTCGTGAGAGCAAATGGTCACAGTGACACAACTGAGGATGAGATTAAGCAATTCGTTTCCAAACAGGTGGTGTTTTACAAGAGAATTAACCGAGTTTTCTTCGTTGATGCCATTCCCAAGTCACCCTCCGGCAAAATATTACGAAAGGATCTAAGGGCAAGGCTCGCACTACCTCTTCCAAATTGA 1530 0.5438 MAIGKETMQQQHKKEEEEFIFKSSLPDIYIPNHLPLHSYIFQNLPDFATRPCLINAPTGQVFTYSDVDLKARRVASGLHKHGIRQGDVIMILLPNCPQFVFSFLGASFRGAIATAANPFFTAAEIAKQAKASNARLLVTQSSYYDKVKDLHGHLSLVFVDTPPEGHLHFSELEEADEEDIPEVKISPEDVVALPYSSGTTGLPKGVMLSHRGLVTSVGQQVDGENPNLYYHSEDVIMCVLPMFHIYSLNSVLLCGLRAKAAIVLMPKFEITAFLALVQKHRVTICPVVPPIILAIAKCPDLHNYDLSSIRVLKSGGAPLAKDLEDTVRLKFPNAKLGQGYGMTEAGPVLTMCLTFAKEAIDGKPGACGTVVRNAELKIVDPETEKSLPRNQPGEICIRGHQIMKGYLNDPEATERTIDKEGWLHTGDIXSDVAVVPMKDEAAGEVPVAFVVRANGHSDTTEDEIKQFVSKQVVFYKRINRVFFVDAIPKSPSGKILRKDLRARLALPLPN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g00038 510 Gene3D - 427 482 IPR045851 -
Arst4g00038 510 Gene3D - 13 426 IPR042099 -
Arst4g00038 510 FunFam Long-chain-fatty-acid--CoA ligase FadD 22 431 - -
Arst4g00038 510 CDD 4CL 30 500 - -
Arst4g00038 510 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 430 502 - -
Arst4g00038 510 Pfam AMP-binding enzyme C-terminal domain 430 494 IPR025110 -
Arst4g00038 510 Pfam AMP-binding enzyme 49 428 IPR000873 -
Arst4g00038 510 SUPERFAMILY Acetyl-CoA synthetase-like 22 504 - -
Arst4g00038 510 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g00038 Arst-Chr4 258182 261096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g00038 6 472 Monolignol Biosynthesis Gene Families AT1G51680 62.162 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g00038 K01904 - gmx:100819192 758.444