LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g00013	ATGATGATTGATGACGACATGGAGGCTGGTTCTTTGGGGCCTTACCACGACAGGCCAAGAACTTTCCCCAACATGCGCACTAAACCTTACACCCCACTGATATTTCGTATTCTCCTGGGAATAAATGTCCGTGTTCTATTCATTCTTTTGCTCCTCGGATTTGGGGCTATCTTTTACATGGGAGCCAGTACATCTCCCATCATTGTGTTTGTCATCTCTATTTGTATTCTCAGCTTCCTTGTGTCTATATATCTTACAAAGTGGGTGCTTGCAAAGGATGAGGGACCCCCTGAAATGGTTCAGGTAACTCTATTTCCTATGCTTAACTTTTTATGTCCTGCTCCCACAAACACTCTAGATTTATATTCCCTTTTATTGAATTCTGGTCTTCATTTCGGTTACTGGGTTTTATTTGTGATGTCTTTGACATCATACCTAGGCTATGGATCTTTTCTTCCACCTTTTACATGTTCTTACATGTCATGTATGTTCTGTTTCAGGTCAACTTCTGCTTACATCACTGTAGCTGCATTCCTTTTAGGTGCCCTTTGTTCAGGGATTGCTGGATATGTTGGGATGTGGGTGTCTGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCCGCAAGAGAGGCATTGCAGGTAGCTACTCGTGCTGGCGGTTTATCTGCTATAATCGTCGTTGGTATGGCTGTAATTGGGATAGCAGTTCTTTATGCCACATTTTATGTTTGGCTTGGCGTGGACTCACCAGGGTCGATGAAAGTTACTGATTTGCCGCTTCTTCTGGTTGGATATGGATTTGGTGCTTCCTTCGTTGCACTGTTTGCTCAGTTGGGTGGTGGAATATATACAAAAGCAGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGAGATAATGTAGGAGACTGTGCTGCTAGGGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCTATGATACTTGGAGGAACAATGGCTCAACGTTGTAAAATTGAAGATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCGTCGGTTGGAATATTTTCAATTAGGGGTACACGTGAATCTGGAGTAATGGCTCCAATTGAGGATCCAATGACAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTGTGGCGTTTGCTCTGTCTACACGGTGGTTACTTTATACTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGCTCGTTGGTATTATTACTGCTTATGTTTTTGTCTGGATCACTAAGTATTATACTGACTACAAGCATGAACCTGTGCGCACATTAGCCCTTTCTAGCTCCACTGGTCATGGGACTAATATAATTGCTGGAGTCAGTTTGGGTCTTGAGTCAACTGCTCTTCCTGTCCTTGTCATCAGTGTAGCAATTATTTCAGCTTACTGGCTGGGCCAAACCTGTGGACTAGTAGACGAGACAGGAAACCCAATTGGTGGGCTGTTTGGCACAGCTGTAGCAACTATGGGAATGCTTAGCACTGCAGCTTATATTCTGACGATGGATATGTTTGGCCCAATAGCGGATAACGCTGGAGGCATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATCACCGATGTCCTCGACGCTGTAGGAAACACAACAAAAGCCACCACCAAAGGATTTGCCATTGGTTCTGCTGCTCTTGCATCGTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTGCCGCATTTGCTCATCAACCTTTTAAACAGGTCGATATTGCAGTTCCAGAAGTTTTTGTCGGTGGGTTGTTAGGTTCCATGCTTATATTTGTCTTTAGTGCTTGGGCATGTTCTGCTGTTGGCCGAACTGCGCAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGACTACAAGGAGAAACCAGACTATGGTCGCTGTGTTGCTATTGTAGCTTCGGCATCATTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGTAGTTGGTTTCCTGTTTCGAATTTTGGGTTACTACACAGGGCATCCCTTACTTGGGGCTAAAGTTGTGGCATCTTTGCTGATGTTTGCAACTGTAGCTGGCATTCTTATGGCACTTTTCCTGAACACAGCCGGTGGTGCCTGGGATAATGCAAAGAAGTATATAGAGACTGGCGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCTGTAACAGGAGACACAGTTGGAGACCCTTTCAAGGACACAGCTGGTCCCTCGCTTCATGTTCTCATAAAGATGCTGGCAACGATTACGCTTGTAATGGCTCCAGTGTTCCTGTGA	2454	0.4425	MMIDDDMEAGSLGPYHDRPRTFPNMRTKPYTPLIFRILLGINVRVLFILLLLGFGAIFYMGASTSPIIVFVISICILSFLVSIYLTKWVLAKDEGPPEMVQVTLFPMLNFLCPAPTNTLDLYSLLLNSGLHFGYWVLFVMSLTSYLGYGSFLPPFTCSYMSCMFCFRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQVATRAGGLSAIIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMAPIEDPMTILQKGYSVTIVLAVVAFALSTRWLLYTEQAPSAWFNFALCGLVGIITAYVFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTALPVLVISVAIISAYWLGQTCGLVDETGNPIGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVAAFAHQPFKQVDIAVPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIVVGFLFRILGYYTGHPLLGAKVVASLLMFATVAGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPVFL	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g00013	817	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	65	817	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Arst4g00013	817	Pfam	Inorganic H+ pyrophosphatase	146	812	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Arst4g00013	817	NCBIfam	V-type H(+)-translocating pyrophosphatase	166	816	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Arst4g00013	817	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	157	816	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Arst4g00013	817	PIRSF	H+-PPtase	47	817	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g00013	Arst-Chr4	153602	161012	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g00013	1	817	Primary Pumps ATPases	AT1G16780	81.197	0.0	1336

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g00013	K23025		-	gmx:100787805	1323.15