Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06204 ATGCCTCGTAAGGTAAACTACGGACTCGATTACGACGATGATTATGGCGATGAATATGACGACTATGATGATTATTATGAAGACTATGGAGAAGTACCTGAAACAAAGCAAGAGACACCGAGACCTCCTGGGGTTTGGCGATGCACCATTTGCACGTATGACAATGATGAGAGTATGACATCTTGTCATATTTGTGGTGTTATACGCCGTGACTTTGTTAACACTGGTACATCCAATATTAAACAAACAGACAAAATTATGAATAATGACCATTCTGTTCAATCAAATGTTGAAAGTTTAGAGAATTTAACATCACTAATGCAAAAGGGTAGGCAGGATAGGTCAGCTGAGAGCAAACTTTCAAAGAAGCCAGCAGTTCATCTGGAAACTAGTGATAAAACTTCAAATGTGAATAAGAAAAATGGTACACTTGATATTCGCTCAAGCAAAGGAAAGGCTGGTAGTTCATCTGCAATGCCTGAAGTCAAAGGTATTGATGCAATTAATTTCTCTTCTATCAAAGAGGGAAAATCCGAAAGTCTTTCCAGCAGTTTCAACAAAATAGCTGTGGACGTAAGATCTGGGAATTCAGATAATACTAACTCTAAGGGATCTCGTCCACAAGTTTCTTACAAACCTGAAAAATGGATGCTACCTCAACAAGCTGAAGATACGTTGACTCAGCTGAATCTTGCAATTGTTGGACATGTTGATTCTGGGAAATCAACACTCTCAGGTAGGTTACTTCACCTATTGGGACGGATTTCCCAAAAACAAATGCACAAATTTGAAAAGGAGGCCAAAATACAGGGCAAAGGATCCTTCGCTTATGCTTGGGCGCTTGATGAAAGCTCTGAAGAAAGGGAAAGGGGAATAACTATGACAGTGGCTGTTGCTTATTTTGACACTAAGAAATATCATGTTGTGGTTCTTGACTCCCCCGGGCATAAAGATTTTGTGCCAAACATGATTTCTGGAGCAACACAGGCTGATGCTGCAATTCTTGTCATAGATGCTTCACGTGGTTCATTTGAAGCTGGTATGGATGGTGGCAAGGGACAAACTAGGGAGCATGCACAACTTATTAGAAGCTTTGGTGTTGACCAGGTTATAGTTGCAGTGAATAAGATGGATACGGTAGCATACGCCAAAGATCGATTTGATTATATAAGACAGCAGTTGGGAATGTTTCTGCGCACTTGTGGTTTCAAAGATTCTTGTGTGTCATGGATTCCTATGAGTGCAATGGAAAATCAAAATTTGGTCGCATCCCCTTCTGACGCTAGTTTTAAAAGCTGGTATAACGGACCATATTTGTTAGATGCAATCGACTCACTTCCACCACCTGCTAGAGAATACTCGAAACCTCTGCTAATGCCAATATGTGATGTCATCAAATCACCCACACTTGGACAGGTGTCTGCTTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTAGTTATGCCTGCAGCCGTCATGGGAACAGTACGCTCAATGGAGCGTGACTCTAATGCCTGCAGTGTTGCAAGGGCCGGAGATAATGTATCTGTAACATTGCAAGGTGTTGATGGAAGTAATGTGATTGCAGGAGGTGTGTTATGCCATCCTGACTTTCCTGTTGCAGTTTCTAATCATTTGGAGTTGAAAGTGCTTGTTTTGGATGGTGCAAGCCCTGTATTGATGGGTTCTCAGTTGGAGTTTCATATACACCATGCAAAGGAGCCTGCAAGGGTTTCAAGAATATCATCAATACTTGATCCAAAGACTGGTAAGGTGACCAAAAAGTCACCTCGCTGTCTCACTGCAAAGCAAAGTGCAGTAATTGAGGTAACTTTGCAGGAGCCAGTTTGTGTAGTAGATGTCTCAATTTGTAAAGCTCTTGGCAGGGTATCGCTAAGATCTTCAGGTAGAACAATCGCTGTGGGACTTGTGACGAGAATAATTGAAGAGCTACACTAG 1974 0.4179 MPRKVNYGLDYDDDYGDEYDDYDDYYEDYGEVPETKQETPRPPGVWRCTICTYDNDESMTSCHICGVIRRDFVNTGTSNIKQTDKIMNNDHSVQSNVESLENLTSLMQKGRQDRSAESKLSKKPAVHLETSDKTSNVNKKNGTLDIRSSKGKAGSSSAMPEVKGIDAINFSSIKEGKSESLSSSFNKIAVDVRSGNSDNTNSKGSRPQVSYKPEKWMLPQQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKFEKEAKIQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASRGSFEAGMDGGKGQTREHAQLIRSFGVDQVIVAVNKMDTVAYAKDRFDYIRQQLGMFLRTCGFKDSCVSWIPMSAMENQNLVASPSDASFKSWYNGPYLLDAIDSLPPPAREYSKPLLMPICDVIKSPTLGQVSACGKLEAGALRSGSKVLVMPAAVMGTVRSMERDSNACSVARAGDNVSVTLQGVDGSNVIAGGVLCHPDFPVAVSNHLELKVLVLDGASPVLMGSQLEFHIHHAKEPARVSRISSILDPKTGKVTKKSPRCLTAKQSAVIEVTLQEPVCVVDVSICKALGRVSLRSSGRTIAVGLVTRIIEELH 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06204 657 Pfam Elongation factor Tu C-terminal domain 550 652 IPR004160 -
Arst3g06204 657 Gene3D Translation factors 548 657 - -
Arst3g06204 657 CDD EF1_alpha 230 449 - -
Arst3g06204 657 CDD HBS1_C_III 544 652 - -
Arst3g06204 657 MobiDBLite consensus disorder prediction 1 24 - -
Arst3g06204 657 FunFam elongation factor 1-alpha isoform X4 547 656 - -
Arst3g06204 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 471 IPR027417 -
Arst3g06204 657 MobiDBLite consensus disorder prediction 130 155 - -
Arst3g06204 657 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 226 451 IPR000795 GO:0003924|GO:0005525
Arst3g06204 657 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Arst3g06204 657 PANTHER TRANSLATION FACTOR 224 652 - -
Arst3g06204 657 FunFam Translation elongation factor EF-1 453 543 - -
Arst3g06204 657 PRINTS GTP-binding elongation factor signature 370 379 IPR000795 GO:0003924|GO:0005525
Arst3g06204 657 PRINTS GTP-binding elongation factor signature 289 297 IPR000795 GO:0003924|GO:0005525
Arst3g06204 657 PRINTS GTP-binding elongation factor signature 325 336 IPR000795 GO:0003924|GO:0005525
Arst3g06204 657 PRINTS GTP-binding elongation factor signature 309 319 IPR000795 GO:0003924|GO:0005525
Arst3g06204 657 PRINTS GTP-binding elongation factor signature 230 243 IPR000795 GO:0003924|GO:0005525
Arst3g06204 657 SUPERFAMILY Translation proteins 448 543 IPR009000 -
Arst3g06204 657 Gene3D Translation factors 454 543 - -
Arst3g06204 657 ProSiteProfiles Zinc finger RanBP2 type profile. 42 71 IPR001876 -
Arst3g06204 657 SUPERFAMILY Ran binding protein zinc finger-like 43 69 IPR036443 -
Arst3g06204 657 MobiDBLite consensus disorder prediction 112 129 - -
Arst3g06204 657 MobiDBLite consensus disorder prediction 107 158 - -
Arst3g06204 657 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 549 653 IPR009001 -
Arst3g06204 657 FunFam Elongation factor 1 alpha-like protein 219 450 - -
Arst3g06204 657 Pfam Elongation factor Tu GTP binding domain 229 445 IPR000795 GO:0003924|GO:0005525
Arst3g06204 657 Gene3D - 217 448 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06204 Arst-Chr3 134990420 134996088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06204 44 655 Eukaryotic Initiation Factors Gene Family AT5G10630 60.674 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06204 K14416 - gmx:100798594 980.704