Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06202 ATGCCTCGTAAGGTAAACTACGGACTCGATTACGACGATGATTATGGCGATGAATATGACGACTATGATGATTATTATGAAGACTATGGAGAAGTACCTGAAACAAAGCAAGAGACACCGAGACCTCCTGGGGTTTGGCGATGCACCATTTGCACGTATGACAATGATGAGAGTATGACATCTTGTCATATTTGTGGTGTTATACGCCGTGACTTTGTTAACACTGGTACATCCAATATTAAACAAACAGTTGAAGACATAAGCAAAACATCTGGAGCATCCAAGTTGGCCAGGTCTCTTTTTGCTTCATTACCAAAACAGAATCCAAAAGAGGTTGTATTACTTCCCAAGCAGGATGATGGTTTTCAGACAGATGCCAGTAACTTCTGCAAGCATAGGAATGTTCAAGGAGAATTTCATGAATGTCATAAGGCGTTTAATACTAAAAGCCATTCCCATTTAAACATAGTTCCTTTCAAGTTTGATGTTCCATCCCCTGATGATGTAGTTTATACTGGTCTACGTTCTTCCAAAACAGCTTCAAAAGACAAAATTATGAATAATGACCATTCTGTTCAATCAAATGTTGAAAGTTTAGAGAATTTAACATCACTAATGCAAAAGGGTAGGCAGGATAGGTCAGCTGAGAGCAAACTTTCAAAGAAGCCAGCAGTTCATCTGGAAACTAGTGATAAAACTTCAAATGTGAATAAGAAAAATGGTACACTTGATATTCGCTCAAGCAAAGGAAAGGCTGGTAGTTCATCTGCAATGCCTGAAGTCAAAGGTATTGATGCAATTAATTTCTCTTCTATCAAAGAGGGAAAATCCGAAAGTCTTTCCAGCAGTTTCAACAAAATAGCTGTGGACGTAAGATCTGGGAATTCAGATAATACTAACTCTAAGGGATCTCGTCCACAAGTTTCTTACAAACCTGAAAAATGGATGCTACCTCAACAAGCTGAAGATACGTTGACTCAGCTGAATCTTGCAATTGTTGGACATGTTGATTCTGGGAAATCAACACTCTCAGGTAGGTTACTTCACCTATTGGGACGGATTTCCCAAAAACAAATGCACAAATTTGAAAAGGAGGCCAAAATACAGGGCAAAGGATCCTTCGCTTATGCTTGGGCGCTTGATGAAAGCTCTGAAGAAAGGGAAAGGGGAATAACTATGACAGTGGCTGTTGCTTATTTTGACACTAAGAAATATCATGTTGTGGTTCTTGACTCCCCCGGGCATAAAGATTTTGTGCCAAACATGATTTCTGGAGCAACACAGGCTGATGCTGCAATTCTTGTCATAGATGCTTCACGTGGTTCATTTGAAGCTGGTATGGATGGTGGCAAGGGACAAACTAGGGAGCATGCACAACTTATTAGAAGCTTTGGTGTTGACCAGGTTATAGTTGCAGTGAATAAGATGGATACGGTAGCATACGCCAAAGATCGATTTGATTATATAAGACAGCAGTTGGGAATGTTTCTGCGCACTTGTGGTTTCAAAGATTCTTGTGTGTCATGGATTCCTATGAGTGCAATGGAAAATCAAAATTTGGTCGCATCCCCTTCTGACGCTAGTTTTAAAAGCTGGTATAACGGACCATATTTGTTAGATGCAATCGACTCACTTCCACCACCTGCTAGAGAATACTCGAAACCTCTGCTAATGCCAATATGTGATGTCATCAAATCACCCACACTTGGACAGGTGTCTGCTTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTAGTTATGCCTGCAGCCGTCATGGGAACAGTACGCTCAATGGAGCGTGACTCTAATGCCTGCAGTGTTGCAAGGGCCGGAGATAATGTATCTGTAACATTGCAAGGTGTTGATGGAAGTAATGTGATTGCAGGAGGTGTGTTATGCCATCCTGACTTTCCTGTTGCAGTTTCTAATCATTTGGAGTTGAAAGTGCTTGTTTTGGATGGTGCAAGCCCTGTATTGATGGGTTCTCAGTTGGAGTTTCATATACACCATGCAAAGGAGCCTGCAAGGGTTTCAAGAATATCATCAATACTTGATCCAAAGACTGGTAAGGTGACCAAAAAGTCACCTCGCTGTCTCACTGCAAAGCAAAGTGCAGTAATTGAGGTAACTTTGCAGGAGCCAGTTTGTGTAGTAGATGTCTCAATTTGTAAAGCTCTTGGCAGGGTATCGCTAAGATCTTCAGGTAGAACAATCGCTGTGGGACTTGTGACGAGAATAATTGAAGAGCTACACTAG 2271 0.4135 MPRKVNYGLDYDDDYGDEYDDYDDYYEDYGEVPETKQETPRPPGVWRCTICTYDNDESMTSCHICGVIRRDFVNTGTSNIKQTVEDISKTSGASKLARSLFASLPKQNPKEVVLLPKQDDGFQTDASNFCKHRNVQGEFHECHKAFNTKSHSHLNIVPFKFDVPSPDDVVYTGLRSSKTASKDKIMNNDHSVQSNVESLENLTSLMQKGRQDRSAESKLSKKPAVHLETSDKTSNVNKKNGTLDIRSSKGKAGSSSAMPEVKGIDAINFSSIKEGKSESLSSSFNKIAVDVRSGNSDNTNSKGSRPQVSYKPEKWMLPQQAEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKFEKEAKIQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASRGSFEAGMDGGKGQTREHAQLIRSFGVDQVIVAVNKMDTVAYAKDRFDYIRQQLGMFLRTCGFKDSCVSWIPMSAMENQNLVASPSDASFKSWYNGPYLLDAIDSLPPPAREYSKPLLMPICDVIKSPTLGQVSACGKLEAGALRSGSKVLVMPAAVMGTVRSMERDSNACSVARAGDNVSVTLQGVDGSNVIAGGVLCHPDFPVAVSNHLELKVLVLDGASPVLMGSQLEFHIHHAKEPARVSRISSILDPKTGKVTKKSPRCLTAKQSAVIEVTLQEPVCVVDVSICKALGRVSLRSSGRTIAVGLVTRIIEELH 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06202 756 Pfam Elongation factor Tu GTP binding domain 328 544 IPR000795 GO:0003924|GO:0005525
Arst3g06202 756 SUPERFAMILY Ran binding protein zinc finger-like 43 69 IPR036443 -
Arst3g06202 756 Pfam Elongation factor Tu C-terminal domain 650 751 IPR004160 -
Arst3g06202 756 CDD HBS1_C_III 643 751 - -
Arst3g06202 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 327 570 IPR027417 -
Arst3g06202 756 FunFam elongation factor 1-alpha isoform X4 646 755 - -
Arst3g06202 756 CDD EF1_alpha 329 548 - -
Arst3g06202 756 MobiDBLite consensus disorder prediction 211 228 - -
Arst3g06202 756 PANTHER TRANSLATION FACTOR 323 751 - -
Arst3g06202 756 SUPERFAMILY Translation proteins 547 642 IPR009000 -
Arst3g06202 756 FunFam Translation elongation factor EF-1 552 642 - -
Arst3g06202 756 Gene3D Translation factors 553 642 - -
Arst3g06202 756 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 325 550 IPR000795 GO:0003924|GO:0005525
Arst3g06202 756 Gene3D - 316 547 IPR027417 -
Arst3g06202 756 FunFam Elongation factor 1 alpha-like protein 318 549 - -
Arst3g06202 756 ProSiteProfiles Zinc finger RanBP2 type profile. 42 71 IPR001876 -
Arst3g06202 756 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 648 752 IPR009001 -
Arst3g06202 756 Gene3D Translation factors 647 756 - -
Arst3g06202 756 MobiDBLite consensus disorder prediction 206 258 - -
Arst3g06202 756 PRINTS GTP-binding elongation factor signature 408 418 IPR000795 GO:0003924|GO:0005525
Arst3g06202 756 PRINTS GTP-binding elongation factor signature 424 435 IPR000795 GO:0003924|GO:0005525
Arst3g06202 756 PRINTS GTP-binding elongation factor signature 329 342 IPR000795 GO:0003924|GO:0005525
Arst3g06202 756 PRINTS GTP-binding elongation factor signature 469 478 IPR000795 GO:0003924|GO:0005525
Arst3g06202 756 PRINTS GTP-binding elongation factor signature 388 396 IPR000795 GO:0003924|GO:0005525
Arst3g06202 756 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Arst3g06202 756 MobiDBLite consensus disorder prediction 229 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06202 Arst-Chr3 134990420 134996088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06202 155 754 Eukaryotic Initiation Factors Gene Family AT5G10630 62.292 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06202 K14416 - gmx:100801724 1149.42