Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06199 ATGACTGTATTGCTTTGTGGAAATCACTTGAGTAAATGTCTTAATTTGAAGAACCTCCAGGCCAAGCATATGCGGGGGAACAATTATAACTGCATTCCTATAACACCCAGATCGAGATTAGAGAGGCTACTGAGGGAGAGAGAGCTAAGAAAGTCAAACAAGTATTTTGAGGAGACAAGAGATGGCAACAAAGAAGCGGAACAAGTTTATAGTGACTCGTTAACAGAGAGCGACAGTTTTAATTCTCTCAATGAGGAAGACATTTCTGAAGCACTTGCTGTTGCGAAAGTATTTCCAGATAGAAGTCAAAGGCCGGAGGAGCGGCCACGCAAACAAAGGTTGTTGGTGGTAGCTAATAGGTTGCCCGTCTCAGCTGTTAGGGAGGGTGAGGACTCATTCCACCTTGAGATCAGTGTTGGCGGCCTAGTCAGTGCACTTTTAGCTTTTATTGCCTTTGTTGATGATCTCATACAGGTCATAACAATGAGATGCATTCCAGTTTTTCTTGATGAGCAGATTGTGAATCAATACTATAACGGTTACTGCAACAACATCTTATGGCCTCTTTTTCATTATCTTGGGCTTCCACAAGAAGACAGACTTGCTACCACTCGCAGCTTCCAATCTCAATTTGATGCATATAAGAAGGCAAACCAGATGTTTGCTGATGTAGTAAATAGGTACTATAAGGAAGGAGATGTTGTTTGGTGCCATGATTACCATCTAATGTTCCTTCCAAAATGTTTAAAAGAATACAATGACAAAATGAAAGTTGGCTGGTTTCTTCATACTCCCTTTCCTTCCTCGGAAATTCATAGGACTCTGCCATCAAGGACAGAGCTATTGAGATCTGTACTTGCTGCTGACTTGGTGGGATTCCATACTTATGATTATGCCAGACATTTTGTAAGTGCTTGTACTCGCATTCTTGGGCTTGAAGGGACACCTGAAGGAGTAGAAGATCAAGGGAAGCTAACTCGTGTGGCTGCGTTTCCTATTGGGATTGATTCTGATCGGTTTATTCGAGCCCTTGAACTCCCTGAAGTCCAGGAGCACATGAAAGAACTGAAAGAAAGATTTGCAGGCAGAAAGGTAATGTTGGGCGTTGATCGTCTTGATATGATAAAAGGAATTCCGCAAAAGATATTGGCATTTGAAAAGTTCCTTGAGGAGAACCCACGCTGGCGTGATAAAGTTGTCTTGTTGCAAATTGCTGTACCAACTAGGACAAATGTTCCTGATTATCAAAAGCTTACAAGTCAGGTGCATGAGATTGTTGGCCGCATCAATGGAAGATTTGGAACCCTTACGGCTGTTCCAATACACCATCTGGATCGATCACTTGACTTCTATGCATTATGTGCACTTTATGCTGTTACTGATGTAGCACTTGTTACATCTCTAAGGGATGGAATGAATCTTGTCAGCTATGAATTCGTTGCATGTCAAGCTTCCAAGAAAGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCTGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAATGTCACAGAGGTTGCTGCTTCTATTGGTTATGCACTGGATATGCCAGCCGATGAAAGAGAAAAACGGCATCTAGTTAACTTCAAGCACGTGACAACTCACACTTCACAAGAATGGGCAGCAACTTTTGTGAGTGAACTGAATGATACGATTGTCGAAGCGCAGCTTAGGACAAGACAAGTTCCACCATTACTTCCCAAGGAAGTGGCAGTTGATTGTTACTCAAAATCTAATAACCGATTAATTATACTGGGTTTCAATGCCACTTTGACAGAACCAGTGGATGCCCTTGGAAGGGGTGGTCAAATTAGAGAAATGGAACTTAAATTGCACCCAAATATAAAGAAGCCTTTAAAGAAGTTGTCTGATGATCCAAAGACAACAATTGTTGTTCTGAGTGGGAGTGATCGAACTGTCCTGGACAAAAATTTCAGGGAATACAATATGTGGTTAGCAGCAGAAAATGGGATGTTTCTACGGCATACTTCAGGTGAATGGATGACAACCATGCCTGAAAATTTACATATGGATTGGGTTGATAGCGTAAAGCATGTTTTTGAGTATTTTACCGAAAGAACTCCGCGGTCTCATTTTGAGCTTCGTGAGACTTCAGTTGTATGGAATTACAAGTATGCAGATATTGAGTTTGGAAGGCTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACAGGACCGATATCCAATGCATCTCTTGACGTTGTCCAAGGTGGTCGATCTGTTGAGGTCAGGGCAATTGGTGTCTCAAAGGGAGCAGCTATTGATCGCATCTTAGGAGAGATCGTTCATGACAAAGGAATGAAGGCTCCAATTGATTATGTCTTATGCATCGGGCACTTTCTAGCAAAGGATGAAGATGTCTATAAATTTTTTGAACCTGAGCTTCCTTGTGAATCATCACCATTAGCACGAGCTATGCCTTCCAATTCTTTAAGGTCATCACCTCTGCCAAAATTTCCAGTCAGCAAAAATGGGTCCAAGGCAGCTCGCTATAAGAAGCAACGTTCAATGTCAACCATAGAAAAGTTAGAAATCGATCATGCAAGGGGCGATCCATGGATACCAACTTATCATGATAGAACATCACTACATGAGGGCTCTTCAGTGCTCGATCTTCAAGGCGATAATTACTTCTCTTGTGCTGTTGCACGCAAGAGATCAAGTGCACGCTACTTACTCAAAACCTCAGATGATGTTGTCAATCTCTTAAGTAACATGGCAGATCATTCATCAACACGATCAACTTAA 2802 0.4201 MTVLLCGNHLSKCLNLKNLQAKHMRGNNYNCIPITPRSRLERLLRERELRKSNKYFEETRDGNKEAEQVYSDSLTESDSFNSLNEEDISEALAVAKVFPDRSQRPEERPRKQRLLVVANRLPVSAVREGEDSFHLEISVGGLVSALLAFIAFVDDLIQVITMRCIPVFLDEQIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNRYYKEGDVVWCHDYHLMFLPKCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRTELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALELPEVQEHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPRWRDKVVLLQIAVPTRTNVPDYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFYALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAASIGYALDMPADEREKRHLVNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPKEVAVDCYSKSNNRLIILGFNATLTEPVDALGRGGQIREMELKLHPNIKKPLKKLSDDPKTTIVVLSGSDRTVLDKNFREYNMWLAAENGMFLRHTSGEWMTTMPENLHMDWVDSVKHVFEYFTERTPRSHFELRETSVVWNYKYADIEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAIGVSKGAAIDRILGEIVHDKGMKAPIDYVLCIGHFLAKDEDVYKFFEPELPCESSPLARAMPSNSLRSSPLPKFPVSKNGSKAARYKKQRSMSTIEKLEIDHARGDPWIPTYHDRTSLHEGSSVLDLQGDNYFSCAVARKRSSARYLLKTSDDVVNLLSNMADHSSTRST 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06199 933 Pfam Trehalose-phosphatase 617 813 IPR003337 GO:0003824|GO:0005992
Arst3g06199 933 Gene3D Glycogen Phosphorylase B; 105 341 - -
Arst3g06199 933 FunFam Alpha,alpha-trehalose-phosphate synthase 618 688 - -
Arst3g06199 933 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 113 560 IPR012766 GO:0003825|GO:0005992
Arst3g06199 933 Gene3D - 618 778 IPR023214 -
Arst3g06199 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 105 925 IPR001830 GO:0003824|GO:0005992
Arst3g06199 933 MobiDBLite consensus disorder prediction 56 78 - -
Arst3g06199 933 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 112 563 - -
Arst3g06199 933 Gene3D - 684 764 - -
Arst3g06199 933 MobiDBLite consensus disorder prediction 824 845 - -
Arst3g06199 933 SUPERFAMILY HAD-like 592 780 IPR036412 -
Arst3g06199 933 CDD HAD_TPP 593 812 - -
Arst3g06199 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 342 544 - -
Arst3g06199 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 105 341 - -
Arst3g06199 933 Gene3D Glycogen Phosphorylase B; 342 544 - -
Arst3g06199 933 CDD GT20_TPS 113 560 IPR001830 GO:0003824|GO:0005992
Arst3g06199 933 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 684 764 - -
Arst3g06199 933 Pfam Glycosyltransferase family 20 161 560 IPR001830 GO:0003824|GO:0005992
Arst3g06199 933 MobiDBLite consensus disorder prediction 824 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06199 Arst-Chr3 134978335 134985340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06199 24 930 Trehalose Biosynthesis Gene Families AT1G78580 72.363 0.0 1333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06199 K16055 - gmx:100816642 1502.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06199 3 134978335 134985340 Arst3g06199 3 134978335 134985340 ECH