Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06189 ATGGAATTCAGAATCTTCTTTGCTTTATCAATCATTGCTTTGAGTTGTTTCAGATGGATGAGGTTTGCAGAATCCAAATTACCACAGGAAGAAGTTGATGCTCTTGGAGAAATCACTACCGTGATGGGTGTCACCCACTGGGAATTTGATGGTGATACTTGTCAAATTAAAAAGGTGACATTAGAGCCACCCAGTGAAGCTAAAAGCAGCATTGGTTGTGAGTACCATCCTGAAAAGGACAACTTCTCTCATGTAGTAAGGATTGCCCTAATGGCTAATCGTTTATCGGGGGAGATTCCTAAGGAGTTGGGAAATATTGAAACTCTAACGAACCTGGACCTTGAAGCAAACCAATTCTCTGGTCATGTACCCTCTCAACTTGGAAATCTGATTAACCTGCAAAGATTGGTTCTAGCATCCAATAATTTGTCTGGGACCCTACCAGAGACATTTGCTCTATTACATAATTTGACAGAGTTTAGGATAAGTGATAATAGTTTCAGTGGAAAAATACCCAGCTTCATTCAGAACTGGAAGCTACTTCAAAGACTAGATATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCTCTTTTGAGTAATTTAACTATTTTGAGGATTAGTGACATAGATGGTCCAAGTCAGGCTTTTCCAGTTTTAAGCAGCATGAAGAAAATGAGAAGATTGGTTTTGAGAAACTGCAATATTACTGGAGAGATTCCTAGTGACATCTGGAAACTGGAGAATTTGAAAATGCTGGATGTGAGTTTTAATCAGTTGGTTGGCGAAATTCCAACTATTAAACCTGCAGCACCAATGACTTTTATCTTCCTAACTGGCAACAAACTAACTGGTAATGTACCTGACTCAATCTTGGCGGCGGGAGGCAATGTTGATCTTTCTTATAACAACCTTACGTGGCAAGGACCTGGGCAACCTGCTTGTCAAGATAACTTGAATTTAAACTTAAACTTGTTCCGGAGTTCTTTGGGGACCACAAAATTACAGGCTGTTCTCCCATGTTCAAAGACCTTTAAGTGTCCTAGATACTCAAGCTGTTTGCATGTTAATAGTGGTGGTAAGGATGTAATGATGAAAGAAAATGGTGAAAATATCCTTTATATAGGGGATAGTGTGCCGGGTGGTACTGCTGAATATTATAATGACCATGAAAAGCTTTGGGGCTTTAGCAGCACTGGTGACTTCATGGATGATGATGACATCCAAAATACACGTTACACCAAGGCATTGTCACCTTCAAATTTGTCTGAATTATATGCAACGGCACGAGTGTCCCCTATTTCGCTCACCTATTTCCATTATTGCCTGGAAAATGGGAACTATACAGTAAAGCTCCACTTTGCAGAAATACAGTTTACTAATGATAGGACATGTAACAGTCTTGGGAAACGCTTTTTCAATATCTATATCCAGGATGGACTAGTTTTGAAGGATTTTAACATTGAAGAGAAAGCACATGGTGCTCAAAAACCATATATAGCAACAATTCCTAACGTCAGCATAACAGACAATATTCTAGAGATCCGACTCTACTATGCTGGCAAGGGAACTGAAAGGATTCCTTATCCTGCAGCTTATGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTAATTCTAAACCTTGTTCAGTCCAAAAGAAAGCAGTGAATTATATAATAGTTGGAGTTGGATTTGGAATTTCAGCTGTTTGCCTAGTCCTTATTATAGTAGGGATCCTTTGGCGGATATTCTTCTTCAAAGGAATAATTAGGACAGAAAAAGGTGTTGATGGACAATATAATCAGACAGGGACATATACATTAGAACAAATTAGAGCTGCCACAAATGATTTCTCTCCTGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAGTTATCCGATGGTACTTGGGTAGCGGTCAAACAGCTTTCTTCGAAGTCACGGCAGGGGAATCGTGAATTTTTAAATGAGATAGCCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAAACAATCAACTAATGCTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCATGCTTTATTCAGCTCAGAGAATCAGCTTAAACTTGATTGGTCAACAAGGCATAGAATCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTACATGAAGAATCAAGACTCAAGATTGTTCATCGTGATATCAAATCTACTAATGTGTTACTGGATGGGAACTTAAACCCTAAAATATCCGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAAGAGACTCACATCAGCACCAGAGTGGCAGGAACAGTAGGATACATGGCACCGGAATATGCATTATGGGGTCACCTTTCTTACAAGGCTGATGTATACAGTTATGGAATTGTGGTCTTGGAAATTGTCAGTGGAAAGAACAATAAAAGTTACATGCCAAGTGATGATTGTTTTTGTCTTTTAGATAAGGCATTTCATCTTCAATCCACTGAAAACATAATGGAACTGGTTGATGAAAGGCTGGGATTAGAGGTGAACCCAACCGAAGCAGAAAACATGGTGAAGGTAGCTCTGCTGTGTACGAATGTATCGCCGTCTCTTAGGCCTACAATGTCAGAGGTTGTGAACATGCTTGAAGATAAAATGAGCATCCCAGATGTTATACCGGAAAATTTTTTTCGTGAAGATTTAAGGCTTAGAGCCATAAGAGACATCTATCAACACGGAGAAAATCAAAGTTTGACTTCAAGCAAAACAGGCAGTTTAATAGGATATTTTGTACCTACTTCTTCCTCAGTCTCTGGCAATGACATGCATGAGATATGCTCAAAATCATAG 2877 0.3942 MEFRIFFALSIIALSCFRWMRFAESKLPQEEVDALGEITTVMGVTHWEFDGDTCQIKKVTLEPPSEAKSSIGCEYHPEKDNFSHVVRIALMANRLSGEIPKELGNIETLTNLDLEANQFSGHVPSQLGNLINLQRLVLASNNLSGTLPETFALLHNLTEFRISDNSFSGKIPSFIQNWKLLQRLDMHASGLEGPIPSNISLLSNLTILRISDIDGPSQAFPVLSSMKKMRRLVLRNCNITGEIPSDIWKLENLKMLDVSFNQLVGEIPTIKPAAPMTFIFLTGNKLTGNVPDSILAAGGNVDLSYNNLTWQGPGQPACQDNLNLNLNLFRSSLGTTKLQAVLPCSKTFKCPRYSSCLHVNSGGKDVMMKENGENILYIGDSVPGGTAEYYNDHEKLWGFSSTGDFMDDDDIQNTRYTKALSPSNLSELYATARVSPISLTYFHYCLENGNYTVKLHFAEIQFTNDRTCNSLGKRFFNIYIQDGLVLKDFNIEEKAHGAQKPYIATIPNVSITDNILEIRLYYAGKGTERIPYPAAYGPLISAFSIVSNSKPCSVQKKAVNYIIVGVGFGISAVCLVLIIVGILWRIFFFKGIIRTEKGVDGQYNQTGTYTLEQIRAATNDFSPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKLHGFCIENNQLMLVYEYMENNSLAHALFSSENQLKLDWSTRHRICIGIAKGLAFLHEESRLKIVHRDIKSTNVLLDGNLNPKISDFGLARLDEEEETHISTRVAGTVGYMAPEYALWGHLSYKADVYSYGIVVLEIVSGKNNKSYMPSDDCFCLLDKAFHLQSTENIMELVDERLGLEVNPTEAENMVKVALLCTNVSPSLRPTMSEVVNMLEDKMSIPDVIPENFFREDLRLRAIRDIYQHGENQSLTSSKTGSLIGYFVPTSSSVSGNDMHEICSKS 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06189 958 ProSiteProfiles Protein kinase domain profile. 621 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06189 958 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 354 548 - -
Arst3g06189 958 CDD STKc_IRAK 627 892 - -
Arst3g06189 958 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Arst3g06189 958 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Arst3g06189 958 FunFam Putative LRR receptor-like serine/threonine-protein kinase 697 903 - -
Arst3g06189 958 SUPERFAMILY L domain-like 79 314 - -
Arst3g06189 958 Pfam Malectin domain 356 543 IPR021720 -
Arst3g06189 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Arst3g06189 958 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 78 920 - -
Arst3g06189 958 SUPERFAMILY Protein kinase-like (PK-like) 606 892 IPR011009 -
Arst3g06189 958 Pfam Protein tyrosine and serine/threonine kinase 625 891 IPR001245 GO:0004672|GO:0006468
Arst3g06189 958 Gene3D Ribonuclease Inhibitor 29 216 IPR032675 -
Arst3g06189 958 Gene3D Ribonuclease Inhibitor 217 357 IPR032675 -
Arst3g06189 958 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 147 214 - -
Arst3g06189 958 Gene3D - 358 550 - -
Arst3g06189 958 Gene3D Phosphorylase Kinase; domain 1 593 696 - -
Arst3g06189 958 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 591 696 - -
Arst3g06189 958 Gene3D Transferase(Phosphotransferase) domain 1 697 900 - -
Arst3g06189 958 SMART serkin_6 621 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06189 Arst-Chr3 134922400 134929608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06189 7 786 Receptor kinase-like Gene Family AT1G29750 55.342 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g06189 PK_Tyr_Ser-Thr 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06189 - - mtr:11406167 1327