Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06188 ATGGAATTCAGAATCTTCTTTGCTTTATCAATCATTGCTTTGAGTTGTTTCAGATGGATGAGGTTTGCAGAATCCAAATTACCACAGGAAGAAGTTGATGCTCTTGGAGAAATCACTACCGTGATGGGTGTCACCCACTGGGAATTTGATGGTGATACTTGTCAAATTAAAAAGGTGACATTAGAGCCACCCAGTGAAGCTAAAAGCAGCATTGGTTGTGAGTACCATCCTGAAAAGGACAACTTCTCTCATGTAGTAAGGATTGAGTTCAAATGGTACAATCTTCCTGGCACTCTTCCACCTCAGATGGTTAAGCTTCCTTACCTCAGACAAATTGCCCTAATGGCTAATCGTTTATCGGGGGAGATTCCTAAGGAGTTGGGAAATATTGAAACTCTAACGAACCTGGACCTTGAAGCAAACCAATTCTCTGGTCATGTACCCTCTCAACTTGGAAATCTGATTAACCTGCAAAGATTGGTTCTAGCATCCAATAATTTGTCTGGGACCCTACCAGAGACATTTGCTCTATTACATAATTTGACAGAGTTTAGGATAAGTGATAATAGTTTCAGTGGAAAAATACCCAGCTTCATTCAGAACTGGAAGCTACTTCAAAGACTAGATATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCTCTTTTGAGTAATTTAACTATTTTGAGGATTAGTGACATAGATGGTCCAAGTCAGGCTTTTCCAGTTTTAAGCAGCATGAAGAAAATGAGAAGATTGGTTTTGAGAAACTGCAATATTACTGGAGAGATTCCTAGTGACATCTGGAAACTGGAGAATTTGAAAATGCTGGATGTGAGTTTTAATCAGTTGGTTGGCGAAATTCCAACTATTAAACCTGCAGCACCAATGACTTTTATCTTCCTAACTGGCAACAAACTAACTGGTAATGTACCTGACTCAATCTTGGCGGCGGGAGGCAATGTTGATCTTTCTTATAACAACCTTACGTGGCAAGGACCTGGGCAACCTGCTTGTCAAGATAACTTGAATTTAAACTTAAACTTGTTCCGGAGTTCTTTGGGGACCACAAAATTACAGGCTGTTCTCCCATGTTCAAAGACCTTTAAGTGTCCTAGATACTCAAGCTGTTTGCATGTTAATAGTGGTGGTAAGGATGTAATGATGAAAGAAAATGGTGAAAATATCCTTTATATAGGGGATAGTGTGCCGGGTGGTACTGCTGAATATTATAATGACCATGAAAAGCTTTGGGGCTTTAGCAGCACTGGTGACTTCATGGATGATGATGACATCCAAAATACACGTTACACCAAGGCATTGTCACCTTCAAATTTGTCTGAATTATATGCAACGGCACGAGTGTCCCCTATTTCGCTCACCTATTTCCATTATTGCCTGGAAAATGGGAACTATACAGTAAAGCTCCACTTTGCAGAAATACAGTTTACTAATGATAGGACATGTAACAGTCTTGGGAAACGCTTTTTCAATATCTATATCCAGGATGGACTAGTTTTGAAGGATTTTAACATTGAAGAGAAAGCACATGGTGCTCAAAAACCATATATAGCAACAATTCCTAACGTCAGCATAACAGACAATATTCTAGAGATCCGACTCTACTATGCTGGCAAGGGAACTGAAAGGATTCCTTATCCTGCAGCTTATGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTAATTCTAAACCTTGTTCAGTCCAAAAGAAAGCAGTGAATTATATAATAGTTGGAGTTGGATTTGGAATTTCAGCTGTTTGCCTAGTCCTTATTATAGTAGGGATCCTTTGGCGGATATTCTTCTTCAAAGGAATAATTAGGACAGAAAAAGGTGTTGATGGACAATATAATCAGACAGGGACATATACATTAGAACAAATTAGAGCTGCCACAAATGATTTCTCTCCTGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAGTTATCCGATGGTACTTGGGTAGCGGTCAAACAGCTTTCTTCGAAGTCACGGCAGGGGAATCGTGAATTTTTAAATGAGATAGCCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAAACAATCAACTAATGCTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCATGCTTTATTCAGCTCAGAGAATCAGCTTAAACTTGATTGGTCAACAAGGCATAGAATCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTACATGAAGAATCAAGACTCAAGATTGTTCATCGTGATATCAAATCTACTAATGTGTTACTGGATGGGAACTTAAACCCTAAAATATCCGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAAGAGACTCACATCAGCACCAGAGTGGCAGGAACAGTAGGATACATGGCACCGGAATATGCATTATGGGGTCACCTTTCTTACAAGGCTGATGTATACAGTTATGGAATTGTGGTCTTGGAAATTGTCAGTGGAAAGAACAATAAAAGTTACATGCCAAGTGATGATTGTTTTTGTCTTTTAGATAAGGCATTTCATCTTCAATCCACTGAAAACATAATGGAACTGGTTGATGAAAGGCTGGGATTAGAGGTGAACCCAACCGAAGCAGAAAACATGGTGAAGGTAGCTCTGCTGTGTACGAATGTATCGCCGTCTCTTAGGCCTACAATGTCAGAGGTTGTGAACATGCTTGAAGATAAAATGAGCATCCCAGATGTTATACCGGAAAATTTTTTTCGTGAAGATTTAAGGCTTAGAGCCATAAGAGACATCTATCAACACGGAGAAAATCAAAGTTTGACTTCAAGCAAAACAGGCAGTTTAATAGGATATTTTGTACCTACTTCTTCCTCAGTCTCTGGCAATGACATGCATGAGATATGCTCAAAATCATAG 2949 0.395 MEFRIFFALSIIALSCFRWMRFAESKLPQEEVDALGEITTVMGVTHWEFDGDTCQIKKVTLEPPSEAKSSIGCEYHPEKDNFSHVVRIEFKWYNLPGTLPPQMVKLPYLRQIALMANRLSGEIPKELGNIETLTNLDLEANQFSGHVPSQLGNLINLQRLVLASNNLSGTLPETFALLHNLTEFRISDNSFSGKIPSFIQNWKLLQRLDMHASGLEGPIPSNISLLSNLTILRISDIDGPSQAFPVLSSMKKMRRLVLRNCNITGEIPSDIWKLENLKMLDVSFNQLVGEIPTIKPAAPMTFIFLTGNKLTGNVPDSILAAGGNVDLSYNNLTWQGPGQPACQDNLNLNLNLFRSSLGTTKLQAVLPCSKTFKCPRYSSCLHVNSGGKDVMMKENGENILYIGDSVPGGTAEYYNDHEKLWGFSSTGDFMDDDDIQNTRYTKALSPSNLSELYATARVSPISLTYFHYCLENGNYTVKLHFAEIQFTNDRTCNSLGKRFFNIYIQDGLVLKDFNIEEKAHGAQKPYIATIPNVSITDNILEIRLYYAGKGTERIPYPAAYGPLISAFSIVSNSKPCSVQKKAVNYIIVGVGFGISAVCLVLIIVGILWRIFFFKGIIRTEKGVDGQYNQTGTYTLEQIRAATNDFSPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKLHGFCIENNQLMLVYEYMENNSLAHALFSSENQLKLDWSTRHRICIGIAKGLAFLHEESRLKIVHRDIKSTNVLLDGNLNPKISDFGLARLDEEEETHISTRVAGTVGYMAPEYALWGHLSYKADVYSYGIVVLEIVSGKNNKSYMPSDDCFCLLDKAFHLQSTENIMELVDERLGLEVNPTEAENMVKVALLCTNVSPSLRPTMSEVVNMLEDKMSIPDVIPENFFREDLRLRAIRDIYQHGENQSLTSSKTGSLIGYFVPTSSSVSGNDMHEICSKS 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06188 982 FunFam Putative LRR receptor-like serine/threonine-protein kinase 721 927 - -
Arst3g06188 982 FunFam Leucine-rich repeat receptor protein kinase EMS1 77 172 - -
Arst3g06188 982 Pfam Malectin domain 380 567 IPR021720 -
Arst3g06188 982 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 615 720 - -
Arst3g06188 982 ProSiteProfiles Protein kinase domain profile. 645 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06188 982 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Arst3g06188 982 SUPERFAMILY Protein kinase-like (PK-like) 630 916 IPR011009 -
Arst3g06188 982 Gene3D Phosphorylase Kinase; domain 1 617 720 - -
Arst3g06188 982 Gene3D Ribonuclease Inhibitor 39 198 IPR032675 -
Arst3g06188 982 Gene3D Transferase(Phosphotransferase) domain 1 721 924 - -
Arst3g06188 982 SMART serkin_6 645 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06188 982 SUPERFAMILY L domain-like 73 315 - -
Arst3g06188 982 Gene3D - 378 574 - -
Arst3g06188 982 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 378 572 - -
Arst3g06188 982 CDD STKc_IRAK 651 916 - -
Arst3g06188 982 Pfam Protein tyrosine and serine/threonine kinase 649 915 IPR001245 GO:0004672|GO:0006468
Arst3g06188 982 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 173 238 - -
Arst3g06188 982 Pfam Leucine rich repeat 132 190 IPR001611 GO:0005515
Arst3g06188 982 Gene3D Ribonuclease Inhibitor 203 374 IPR032675 -
Arst3g06188 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Arst3g06188 982 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 46 944 - -
Arst3g06188 982 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 46 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06188 Arst-Chr3 134922400 134929608 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06188 7 810 Receptor kinase-like Gene Family AT1G29750 57.314 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g06188 PK_Tyr_Ser-Thr 2.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06188 - - mtr:11406167 1377.46