Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06187 ATGGAATTCAGAATCTTCTTTGCTTTATCAATCATTGCTTTGAGTTGTTTCAGATGGATGAGGTTTGCAGAATCCAAATTACCACAGGAAGAAGTTGATGCTCTTGGAGAAATCACTACCGTGATGGGTGTCACCCACTGGGAATTTGATGGTGATACTTGTCAAATTAAAAAGGTGACATTAGAGCCACCCAGTGAAGCTAAAAGCAGCATTGGTTGTGAGTACCATCCTGAAAAGGACAACTTCTCTCATGTAGTAAGGATTGAGTTCAAATGGTACAATCTTCCTGGCACTCTTCCACCTCAGATGGTTAAGCTTCCTTACCTCAGACAAATTGATCTTTCTCTCAACTACCTAAATGGTACCATCCCAAAGGAATGGGCCTCAATGAAACTGACAACAATTGCCCTAATGGCTAATCGTTTATCGGGGGAGATTCCTAAGGAGTTGGGAAATATTGAAACTCTAACGAACCTGGACCTTGAAGCAAACCAATTCTCTGGTCATGTACCCTCTCAACTTGGAAATCTGATTAACCTGCAAAGATTGGTTCTAGCATCCAATAATTTGTCTGGGACCCTACCAGAGACATTTGCTCTATTACATAATTTGACAGAGTTTAGGATAAGTGATAATAGTTTCAGTGGAAAAATACCCAGCTTCATTCAGAACTGGAAGCTACTTCAAAGACTAGATATGCATGCAAGTGGACTGGAGGGACCAATCCCATCAAATATATCTCTTTTGAGTAATTTAACTATTTTGAGGATTAGTGACATAGATGGTCCAAGTCAGGCTTTTCCAGTTTTAAGCAGCATGAAGAAAATGAGAAGATTGGTTTTGAGAAACTGCAATATTACTGGAGAGATTCCTAGTGACATCTGGAAACTGGAGAATTTGAAAATGCTGGATGTGAGTTTTAATCAGTTGGTTGGCGAAATTCCAACTATTAAACCTGCAGCACCAATGACTTTTATCTTCCTAACTGGCAACAAACTAACTGGTAATGTACCTGACTCAATCTTGGCGGCGGGAGGCAATGTTGATCTTTCTTATAACAACCTTACGTGGCAAGGACCTGGGCAACCTGCTTGTCAAGATAACTTGAATTTAAACTTAAACTTGTTCCGGAGTTCTTTGGGGACCACAAAATTACAGGCTGTTCTCCCATGTTCAAAGACCTTTAAGTGTCCTAGATACTCAAGCTGTTTGCATGTTAATAGTGGTGGTAAGGATGTAATGATGAAAGAAAATGGTGAAAATATCCTTTATATAGGGGATAGTGTGCCGGGTGGTACTGCTGAATATTATAATGACCATGAAAAGCTTTGGGGCTTTAGCAGCACTGGTGACTTCATGGATGATGATGACATCCAAAATACACGTTACACCAAGGCATTGTCACCTTCAAATTTGTCTGAATTATATGCAACGGCACGAGTGTCCCCTATTTCGCTCACCTATTTCCATTATTGCCTGGAAAATGGGAACTATACAGTAAAGCTCCACTTTGCAGAAATACAGTTTACTAATGATAGGACATGTAACAGTCTTGGGAAACGCTTTTTCAATATCTATATCCAGGATGGACTAGTTTTGAAGGATTTTAACATTGAAGAGAAAGCACATGGTGCTCAAAAACCATATATAGCAACAATTCCTAACGTCAGCATAACAGACAATATTCTAGAGATCCGACTCTACTATGCTGGCAAGGGAACTGAAAGGATTCCTTATCCTGCAGCTTATGGTCCCCTCATATCAGCTTTCTCTATTGTTTCTAATTCTAAACCTTGTTCAGTCCAAAAGAAAGCAGTGAATTATATAATAGTTGGAGTTGGATTTGGAATTTCAGCTGTTTGCCTAGTCCTTATTATAGTAGGGATCCTTTGGCGGATATTCTTCTTCAAAGGAATAATTAGGACAGAAAAAGGTGTTGATGGACAATATAATCAGACAGGGACATATACATTAGAACAAATTAGAGCTGCCACAAATGATTTCTCTCCTGCTAACAAGATTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAGTTATCCGATGGTACTTGGGTAGCGGTCAAACAGCTTTCTTCGAAGTCACGGCAGGGGAATCGTGAATTTTTAAATGAGATAGCCATGATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAAACAATCAACTAATGCTGGTGTATGAGTACATGGAAAATAATAGCCTGGCTCATGCTTTATTCAGCTCAGAGAATCAGCTTAAACTTGATTGGTCAACAAGGCATAGAATCTGTATTGGCATAGCAAAAGGTCTTGCATTTCTACATGAAGAATCAAGACTCAAGATTGTTCATCGTGATATCAAATCTACTAATGTGTTACTGGATGGGAACTTAAACCCTAAAATATCCGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAAGAGACTCACATCAGCACCAGAGTGGCAGGAACAGTAGGATACATGGCACCGGAATATGCATTATGGGGTCACCTTTCTTACAAGGCTGATGTATACAGTTATGGAATTGTGGTCTTGGAAATTGTCAGTGGAAAGAACAATAAAAGTTACATGCCAAGTGATGATTGTTTTTGTCTTTTAGATAAGGCATTTCATCTTCAATCCACTGAAAACATAATGGAACTGGTTGATGAAAGGCTGGGATTAGAGGTGAACCCAACCGAAGCAGAAAACATGGTGAAGGTAGCTCTGCTGTGTACGAATGTATCGCCGTCTCTTAGGCCTACAATGTCAGAGGTTGTGAACATGCTTGAAGATAAAATGAGCATCCCAGATGTTATACCGGAAAATTTTTTTCGTGAAGATTTAAGGCTTAGAGCCATAAGAGACATCTATCAACACGGAGAAAATCAAAGTTTGACTTCAAGCAAAACAGGCAGTTTAATAGGATATTTTGTACCTACTTCTTCCTCAGTCTCTGGCAATGACATGCATGAGATATGCTCAAAATCATAG 3018 0.3953 MEFRIFFALSIIALSCFRWMRFAESKLPQEEVDALGEITTVMGVTHWEFDGDTCQIKKVTLEPPSEAKSSIGCEYHPEKDNFSHVVRIEFKWYNLPGTLPPQMVKLPYLRQIDLSLNYLNGTIPKEWASMKLTTIALMANRLSGEIPKELGNIETLTNLDLEANQFSGHVPSQLGNLINLQRLVLASNNLSGTLPETFALLHNLTEFRISDNSFSGKIPSFIQNWKLLQRLDMHASGLEGPIPSNISLLSNLTILRISDIDGPSQAFPVLSSMKKMRRLVLRNCNITGEIPSDIWKLENLKMLDVSFNQLVGEIPTIKPAAPMTFIFLTGNKLTGNVPDSILAAGGNVDLSYNNLTWQGPGQPACQDNLNLNLNLFRSSLGTTKLQAVLPCSKTFKCPRYSSCLHVNSGGKDVMMKENGENILYIGDSVPGGTAEYYNDHEKLWGFSSTGDFMDDDDIQNTRYTKALSPSNLSELYATARVSPISLTYFHYCLENGNYTVKLHFAEIQFTNDRTCNSLGKRFFNIYIQDGLVLKDFNIEEKAHGAQKPYIATIPNVSITDNILEIRLYYAGKGTERIPYPAAYGPLISAFSIVSNSKPCSVQKKAVNYIIVGVGFGISAVCLVLIIVGILWRIFFFKGIIRTEKGVDGQYNQTGTYTLEQIRAATNDFSPANKIGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIAMISCLQHPNLVKLHGFCIENNQLMLVYEYMENNSLAHALFSSENQLKLDWSTRHRICIGIAKGLAFLHEESRLKIVHRDIKSTNVLLDGNLNPKISDFGLARLDEEEETHISTRVAGTVGYMAPEYALWGHLSYKADVYSYGIVVLEIVSGKNNKSYMPSDDCFCLLDKAFHLQSTENIMELVDERLGLEVNPTEAENMVKVALLCTNVSPSLRPTMSEVVNMLEDKMSIPDVIPENFFREDLRLRAIRDIYQHGENQSLTSSKTGSLIGYFVPTSSSVSGNDMHEICSKS 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06187 1005 Gene3D Ribonuclease Inhibitor 264 404 IPR032675 -
Arst3g06187 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase 744 950 - -
Arst3g06187 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 401 595 - -
Arst3g06187 1005 Gene3D - 405 597 - -
Arst3g06187 1005 SUPERFAMILY Protein kinase-like (PK-like) 653 939 IPR011009 -
Arst3g06187 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 195 261 - -
Arst3g06187 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Arst3g06187 1005 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Arst3g06187 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 967 - -
Arst3g06187 1005 SUPERFAMILY L domain-like 79 340 - -
Arst3g06187 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 967 - -
Arst3g06187 1005 Gene3D Transferase(Phosphotransferase) domain 1 744 947 - -
Arst3g06187 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 638 743 - -
Arst3g06187 1005 Gene3D Ribonuclease Inhibitor 197 263 IPR032675 -
Arst3g06187 1005 Gene3D Ribonuclease Inhibitor 38 196 IPR032675 -
Arst3g06187 1005 CDD STKc_IRAK 674 939 - -
Arst3g06187 1005 Pfam Malectin domain 403 590 IPR021720 -
Arst3g06187 1005 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515
Arst3g06187 1005 ProSiteProfiles Protein kinase domain profile. 668 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06187 1005 SMART serkin_6 668 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06187 1005 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 194 - -
Arst3g06187 1005 Gene3D Phosphorylase Kinase; domain 1 640 743 - -
Arst3g06187 1005 Pfam Protein tyrosine and serine/threonine kinase 672 938 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06187 Arst-Chr3 134922400 134929608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06187 7 833 Receptor kinase-like Gene Family AT1G29750 59.113 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g06187 PK_Tyr_Ser-Thr 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06187 - - mtr:11406167 1428.31