Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06184 ATGGGTGAGTATTCATCAAGAAGCGGTGATGTTGCTATCTCTGTAACTAGTAAGGAGGAAGCAGGAGGAGGTGGGACCTGCAAAACAGGCAAATATTTTCTTCTGTTTCAGAAGATGGTGGCGGAGTTGGTGGGGACGTATTTCTTGATATTTACAGGGTGCGCAGCGATTGCGGTGAACAACGACTACGGGAAGCAAATAACGCTTCTTGGAATTGCAACTGTTTGGGGATTGGTTGTCATGGTCATCGTTTACTCCGTTGGTCATGTCTCTGGGGCCCATCTCAACCCTGCCGTCACTATTGCTTTTGCCTCCATCACAAAGTTTCCACTCACTCAGGTACCGGCTTATATAGCAGCTGAATTGCTTGGAGCGATCCTAGCAAGCGGAACAGTGAGACTAGTATTTAGTGGGAACCACGTTGAAGTTCAGTTCACAGGAACGTTGCCGAGTGGCTCAAACATCCAATCCTTCGTCCTTGAATTCATTATCACTTTTTTCCTTATGTTTGTCATTTGCGCCGTTGCTACCGATAGCAGAGCGGTTGGTACCTTGGCTGGAGTTGCAATCGGGTCTACCATACTAATTAATGTGCTGATTGCAGCGCAAGTGTCAGGAGCATCAATGAACCCAGCAAGGAGTCTAGGACCTGCATTTGTGCACCATGAATACAGAGGAATATGGATATACTTGTTGTCACCCACCATTGGAGCTGTGGCGGCTGCATGGGTCTACAACATACTTAGGGAGAAGAAGGACAAGCCCATCATTCAGATCACCAAGAATGCCTCTTTCAACTGA 801 0.4719 MGEYSSRSGDVAISVTSKEEAGGGGTCKTGKYFLLFQKMVAELVGTYFLIFTGCAAIAVNNDYGKQITLLGIATVWGLVVMVIVYSVGHVSGAHLNPAVTIAFASITKFPLTQVPAYIAAELLGAILASGTVRLVFSGNHVEVQFTGTLPSGSNIQSFVLEFIITFFLMFVICAVATDSRAVGTLAGVAIGSTILINVLIAAQVSGASMNPARSLGPAFVHHEYRGIWIYLLSPTIGAVAAAWVYNILREKKDKPIIQITKNASFN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06184 266 Pfam Major intrinsic protein 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 PRINTS Major intrinsic protein family signature 191 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 PRINTS Major intrinsic protein family signature 228 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Arst3g06184 266 SUPERFAMILY Aquaporin-like 33 251 IPR023271 -
Arst3g06184 266 CDD MIP 37 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 NCBIfam MIP family channel protein 41 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst3g06184 266 Gene3D Glycerol uptake facilitator protein. 10 257 IPR023271 -
Arst3g06184 266 PANTHER AQUAPORIN NIP2-1 32 260 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06184 Arst-Chr3 134883256 134887494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06184 18 265 Major Intrinsic Protein MIP AT5G37820 53.600 2.69e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06184 K09874 - gmx:547904 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06184 3 134883256 134887494 Arst10g00038 10 711259 712790 PCT