Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06180 ATGAAGTGGGGTGGAAGAAAATCATCACCAGCTTCTTCTTCTAATAGTATTAATAATAATACTAAGCATTCTTTCATCTCTCAAGTGTCTCCTTTTTCATGGCTGTCCAAGTTCAAGCAGATGAGGATTAACTCGGAGCGAAAGCCGGGGCAGAATGCAAAGCAGAATTCTGTTCCATCTTATGGTTCAGCACCAAAGGATGCATGTGGGAATAGAGGTAGGTTTTATGGAGGGGAAGATGATGCCTTCTGGAGACTCTCATTTGGTGAAGAGAGTCATGAGCATAACAAGAGTAGTGAAGATATCTTGAAATCAACACTGCACAATTTGGATGGTGATCATGCCAATGATGTCATTCAGTCCTCAGCACAATTTGGACTGAGTGATAAAAGACATGGAAGAAGAGAAGCTAGTCTGAGGTTGAAGCAGAAGGATATTGGAATGGGAGAGGAAAGAAAGTTGCCATGTGAGAATGAGTGTGATCATGGAGGAAAGGAATTTGAATTCTTAAGGAGGAGATATGAAAGGAAAGCACAAAAGGTTTTTCAAGATCAACTCTTGAAACTAGAAAAAGCTGCAGATAATCTAGAATCTGAATTTGCATCTAGCAACTCTAAGTCCTTGGAAAATGATGTGCTGAAATCCGAATCGCCTAGAACGATTCGAACACCAAGAACAAATTCGTACATCTCTGTAAATTCAAAGAATTCTGGCGATGGAAATATTAAAGAAGGTGGTGTTAACTCTGGGAAGAATACTGAAGAGTTGAGAGTGAAGGTTAACAAGAAAAGGCAATCACTTCATGTAGGCAAAGAACTTCAGAGGAGGAAGCCAAGGAATAGTCCAAGGGTAAGAGTGCATTCTCCGAGGATGGCTTCCAAGGTCGAAATCTGCAAAATAAAGGCCATAGAAGACATGAAGAAAGCAAAACTAAAGATGAAGAAAGAGGAGGAAATTTCAGAGGAAACGGCAGGTGTAGACAGCTTTGCTGTGGTGAAATGCTCAATGGATCCGCAACAAGACTTCAGAGATTCGATGATGGAGATGATCGTGCAGAGGAAGATCAGCAGGCCAGAAGAAATGGAGGAGCTGTTGGCATGTTATCTCACACTGAATTCTAGTGAGTATCATGATATCATCATCAAGGTTTTCAGGGAGGTGTGGTTATATGTGAACAAGGTTTGTTGTCTTAAATCAGAAGCAATGCAGTTGCAATGA 1218 0.4089 MKWGGRKSSPASSSNSINNNTKHSFISQVSPFSWLSKFKQMRINSERKPGQNAKQNSVPSYGSAPKDACGNRGRFYGGEDDAFWRLSFGEESHEHNKSSEDILKSTLHNLDGDHANDVIQSSAQFGLSDKRHGRREASLRLKQKDIGMGEERKLPCENECDHGGKEFEFLRRRYERKAQKVFQDQLLKLEKAADNLESEFASSNSKSLENDVLKSESPRTIRTPRTNSYISVNSKNSGDGNIKEGGVNSGKNTEELRVKVNKKRQSLHVGKELQRRKPRNSPRVRVHSPRMASKVEICKIKAIEDMKKAKLKMKKEEEISEETAGVDSFAVVKCSMDPQQDFRDSMMEMIVQRKISRPEEMEELLACYLTLNSSEYHDIIIKVFREVWLYVNKVCCLKSEAMQLQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06180 405 Coils Coil 179 206 - -
Arst3g06180 405 MobiDBLite consensus disorder prediction 255 279 - -
Arst3g06180 405 MobiDBLite consensus disorder prediction 41 62 - -
Arst3g06180 405 MobiDBLite consensus disorder prediction 41 73 - -
Arst3g06180 405 MobiDBLite consensus disorder prediction 229 288 - -
Arst3g06180 405 MobiDBLite consensus disorder prediction 1 22 - -
Arst3g06180 405 MobiDBLite consensus disorder prediction 7 22 - -
Arst3g06180 405 NCBIfam uncharacterized plant-specific domain TIGR01568 329 390 IPR006458 -
Arst3g06180 405 MobiDBLite consensus disorder prediction 229 248 - -
Arst3g06180 405 Pfam Transcriptional repressor, ovate 335 389 IPR006458 -
Arst3g06180 405 ProSiteProfiles OVATE domain profile. 331 390 IPR006458 -
Arst3g06180 405 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 205 391 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06180 Arst-Chr3 134841904 134843121 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Arst3g06180 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06180 - - ahf:112792751 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06180 3 134841904 134843121 Arst3g06180 3 134841904 134843121 ECH
Arst3g06180 3 134841904 134843121 Arst10g00031 10 681481 682771 PCT