LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g06172	ATGAATTATAAGTGTCTTGCATATATATATACAAGCAGAAAAGGTACACATAGAAGGAACAAAATAGAGTGCAAAACAAAGAAAATGGGAAGCAAAGATGTGAAGTTGGTGAGCTATTGGGTGAGTCCGTTCGGTAAAAGAGCTGAGTGGGCATTGAAACTGAAGGGTGTGGAATATGAGTACATAGAAGAAGATATATACAACAAGAGCAACCTTCTTCTTGAGCTGAACCCGGTCCACAAGAAGGTTCCAGTTCTTGTACATGGCAACAAGGCAATCGCGGAATCATTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGTATCCATTGATGCCTCACGATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTATTTCTGCTGAACAAAAGGTTGGGGAAGGCTCATGGATTGCACTGATTAAAAGCGGAGAAGAAAAGGAAAAGGCTCTGGATAAAGCCTCAGAGGTACTTGAGAAGATAGAGGAAGAGATCAAGGGTAAGAAATTCTTTGGAGGGGACAACATTGGATACCTTGACATTGCACTTGGATGGATCCCTTGCATTATTCCCCTTTGGGAGGAAGTTGGGTCAATGCAAATAATTGACCCTCTGAAGTTGCCAGCCATCAATGAATGGATGACCAATTTCCTCAACCACCCTGTTGTCAAGGACTCTCTGCCCCCAAGAGACAAGGCCCTTGATTACTTCCACTCTCTCAAAAAGAAAAATGCACCTAATTAA	750	0.424	MNYKCLAYIYTSRKGTHRRNKIECKTKKMGSKDVKLVSYWVSPFGKRAEWALKLKGVEYEYIEEDIYNKSNLLLELNPVHKKVPVLVHGNKAIAESFVILEYIDETWKQYPLMPHDPYQRAHARFWAISAEQKVGEGSWIALIKSGEEKEKALDKASEVLEKIEEEIKGKKFFGGDNIGYLDIALGWIPCIIPLWEEVGSMQIIDPLKLPAINEWMTNFLNHPVVKDSLPPRDKALDYFHSLKKKNAPN	249

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g06172	249	CDD	GST_C_Tau	117	239	IPR045074	GO:0004364\|GO:0006749
	Arst3g06172	249	SUPERFAMILY	Thioredoxin-like	33	131	IPR036249	-
	Arst3g06172	249	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	32	111	IPR004045	-
	Arst3g06172	249	FunFam	Tau class glutathione S-transferase	113	248	-	-
	Arst3g06172	249	SFLD	Main (cytGST)	30	245	-	-
	Arst3g06172	249	SFLD	Main (cytGST)	30	245	-	-
	Arst3g06172	249	FunFam	Tau class glutathione S-transferase	29	115	-	-
	Arst3g06172	249	Gene3D	-	113	249	-	-
	Arst3g06172	249	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	38	236	IPR045073	-
	Arst3g06172	249	CDD	GST_N_Tau	34	107	-	-
	Arst3g06172	249	Pfam	Glutathione S-transferase, N-terminal domain	34	105	IPR004045	-
	Arst3g06172	249	Gene3D	Glutaredoxin	28	112	-	-
	Arst3g06172	249	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	116	247	IPR010987	-
	Arst3g06172	249	Coils	Coil	146	166	-	-
	Arst3g06172	249	SUPERFAMILY	GST C-terminal domain-like	105	244	IPR036282	-
	Arst3g06172	249	Pfam	Glutathione S-transferase, C-terminal domain	145	223	IPR004046	-
	Arst3g06172	249	SFLD	Main.3: Omega- and Tau-like	30	245	IPR045073	-
	Arst3g06172	249	SFLD	Main.3: Omega- and Tau-like	30	245	IPR045073	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g06172	Arst-Chr3	134785355	134787770	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g06172	32	237	Glutathione S-transferase Gene Family	AT2G29490	47.596	3.65e-65	200

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g06172	K00799		-	gmx:547585	345.125