LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g06171	ATGGGAAGCCAAAAGGAGGAGGTGAAGCTTATAAGCTTTTTGTGTAGTCCAGTTTGTCGCAGAGTTGAATGGGGTCTGAGACTGAAGGGTATTGATTACGAGTACATAGAAGAAGACATCTTCAACAAGAGCAACCTCCTTTTGGAGCTGAACCCTGTCCACAAAAAGGTTCCTGTTCTTGTTCATGGTGACAAGGCAATTGCCGAGTCCCTCGTCATCCTCGAATACATGGATGAAACATGGAAGCAATATCCACTTCTGCCTCAAGATCCTTATGAAAGAGCTCTTGTACGTTTTTGGATCAAGTTTGCCGATGAAAAGGTTATGTACGGTGGATATGTTGCAATGATATCGATCGGGGAGGAGCAGGAAAAGAGAGTGGATGAGGTGAGGAAAGGAATGGACAAGTTAGAAGAACTTATCAAAGGGAAGAGATTCTTTGGAGGTGACAGGATTGGATTCCTTGACATAGCGCTTGGATGGATCACATACTTGCTCCCTGTTTGGGAGGAGGTTGGGTCTATGAAGATTCTGGATCCCCTCAAGTGTCCTGCCATCTCTGCTTGGGTCAACAACATTCTCAACCACCCTCTCCTCAACGACTGCCTCCCCCCTAAGGATGACTTGCTTGCTTATAACCACCGTCGCAGAAAGCAGTTCAATCCTTCTCTTTATCATTAA	681	0.4552	MGSQKEEVKLISFLCSPVCRRVEWGLRLKGIDYEYIEEDIFNKSNLLLELNPVHKKVPVLVHGDKAIAESLVILEYMDETWKQYPLLPQDPYERALVRFWIKFADEKVMYGGYVAMISIGEEQEKRVDEVRKGMDKLEELIKGKRFFGGDRIGFLDIALGWITYLLPVWEEVGSMKILDPLKCPAISAWVNNILNHPLLNDCLPPKDDLLAYNHRRRKQFNPSLYH	226

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g06171	226	FunFam	Tau class glutathione S-transferase	87	223	-	-
	Arst3g06171	226	CDD	GST_C_Tau	91	212	IPR045074	GO:0004364\|GO:0006749
	Arst3g06171	226	Gene3D	-	87	223	-	-
	Arst3g06171	226	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	6	85	IPR004045	-
	Arst3g06171	226	CDD	GST_N_Tau	8	81	-	-
	Arst3g06171	226	SUPERFAMILY	Thioredoxin-like	8	108	IPR036249	-
	Arst3g06171	226	FunFam	Tau class glutathione S-transferase	1	89	-	-
	Arst3g06171	226	Coils	Coil	120	140	-	-
	Arst3g06171	226	SFLD	Main.3: Omega- and Tau-like	4	221	IPR045073	-
	Arst3g06171	226	SFLD	Main.3: Omega- and Tau-like	4	221	IPR045073	-
	Arst3g06171	226	Gene3D	Glutaredoxin	1	86	-	-
	Arst3g06171	226	Pfam	Glutathione S-transferase, N-terminal domain	10	80	IPR004045	-
	Arst3g06171	226	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	90	220	IPR010987	-
	Arst3g06171	226	SUPERFAMILY	GST C-terminal domain-like	79	218	IPR036282	-
	Arst3g06171	226	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	14	208	IPR045073	-
	Arst3g06171	226	SFLD	Main (cytGST)	4	221	-	-
	Arst3g06171	226	SFLD	Main (cytGST)	4	221	-	-
	Arst3g06171	226	Pfam	Glutathione S-transferase, C-terminal domain	121	197	IPR004046	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g06171	Arst-Chr3	134783415	134784902	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g06171	3	221	Glutathione S-transferase Gene Family	AT2G29420	46.119	6.20e-68	206

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g06171	K00799		-	gmx:100791741	313.538