Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06166 ATGGATAGTAAGTTGAGGAACAGGAGTAGTAGGAGTAGCAGAAATCTGTATATGAAGGAACAAGAAGACAATGATGGTTCGGACTCCCCTCCTTCAAATTCCACCCTCTTCAACATTGATGCCTTGGTTACTTCTTCTCCATCATCTTCAAGTAAGAGAAGGCGAGGCGTAGAAAAAAGGGTGGTGCATATAAGAATAAAGGAGGGAGAAGGACCGAGGCTAAAAGGGGAAAACAACACTCCACCACCCTCAGATTCATGGGCATGGAGGAAGTACGGCCAGAAACCCATAAAAGGTTCCCCTTACCCGAGAGGATACTACAGATGTAGCAGCTCAAAGGGGTGTCCGGCGAGAAAGCAAGTAGAGAGAAGCCGAGTGGACCCCACCATGCTGGTAGTTACATATTCATGCGAACACAACCATCCATGGCCTTCTTCACGGAACCACAATAGATCGTCTACTAAGAAGCCCCAGCCCTCCGCCGAGGACCTACTTGTGGACCCGGTCGAACCGGATCTTGAGGGCCACGACTCCATCATTCATGACCTTGGCTGGTTCCGTGATATCTCGGGGGCTCTCACCCCGTCTTTGCCCGCCGTACTGGACAGCCCCATATTCTCTGGCTACGACGATGCGGATGTGGCGGCCTCGGTGGTGCTGCCCATGGGGGACGACGAGGAGTCGCTCTTTGCGGACC 697 0.5251 MDSKLRNRSSRSSRNLYMKEQEDNDGSDSPPSNSTLFNIDALVTSSPSSSSKRRRGVEKRVVHIRIKEGEGPRLKGENNTPPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMLVVTYSCEHNHPWPSSRNHNRSSTKKPQPSAEDLLVDPVEPDLEGHDSIIHDLGWFRDISGALTPSLPAVLDSPIFSGYDDADVAASVVLPMGDDEESLFADLGELPECSLVFRRGLLETAEQRRRWCGTPS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06166 262 SMART WRKY_cls 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g06166 262 MobiDBLite consensus disorder prediction 1 26 - -
Arst3g06166 262 Gene3D WRKY domain 72 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g06166 262 MobiDBLite consensus disorder prediction 142 162 - -
Arst3g06166 262 MobiDBLite consensus disorder prediction 1 91 - -
Arst3g06166 262 SUPERFAMILY WRKY DNA-binding domain 80 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g06166 262 MobiDBLite consensus disorder prediction 27 51 - -
Arst3g06166 262 MobiDBLite consensus disorder prediction 142 159 - -
Arst3g06166 262 ProSiteProfiles WRKY domain profile. 84 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g06166 262 Pfam WRKY DNA -binding domain 85 142 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g06166 262 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 241 IPR044810 GO:0003700
Arst3g06166 262 FunFam WRKY transcription factor 65 72 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06166 Arst-Chr3 134746669 134747670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06166 20 244 WRKY Transcription Factor Family AT1G29280 50.000 6.80e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst3g06166 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06166 - - ahf:112734976 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06166 3 134746669 134747670 Arst3g06166 3 134746669 134747670 ECH