Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06157 ATGGATCAGGCAAGAAGTGAAGACAGTGCTGAGGTGTTGGATAATGTAGTTGGAGAAGGAGTTGCAACTGATGCAGGAGATGGTAGTGAATTGGTTGAGAGAGATGATGTAGTTGGAGAAAATGGAACTTCAGATCTGGGTTTGAATACGGAGCTAGAGGAGGAGGAGGAGACTCGAGTGGTTAAGGATCAGGAAACAGCTGAGTTGCAAAAAATCAGTGATACATTGTGTGGGGTTGAGCAAGGAACTAGTTATAGCTCAAGAAATTTGGTCAGTAGGGAGGATGTACTTGAGACCTGTGTTGTAATAGATCCTCCTGCTCAGATCGAGCATGTCCAGGGAAAATCGAAAGCAAAAGCCAATGAATCAGGGTTGAGCAAGCTAGCCATGAAAGCACCAAAGGCAGTGTCTGAGACAGATAAAAATTCATGTGCAATTGATATAAACAAAGAGTTTAGTGAGAACTTGGAAGGTGAAATGATTTGTAGAATTTGTCATCTGGCATCAGGGCAACCAATAGAAGCAATGATGGTTGGGACTGCTAACAATGAAACTAGTACAGATTTGATTCAACTTGGTTGTGCATGTAAGGATGAGCTAGGCATTGCACACAGTCATTGTGCTGAGGCATGGTTCAAGCTTAAAGGAAACAGGTTGTGTGAAATATGTGGTGAGACTGCAAAAAATGTTTCAGAATCACAGGTTATCAATCATTCATTTATGGAAGAGTGGAACGAAAGTAGGTTCATCGACGGTGGTAATAGTACCTCAACCGGCTTCTTTGGAAGATGTTGGCGTGGACAGCCATTCTGTAACTTTTTGATGGCATGCTTGGTAATAGCTTTCGTTCTACCATGGTTCTTCCGTGTAAATATGTTCTAG 882 0.4218 MDQARSEDSAEVLDNVVGEGVATDAGDGSELVERDDVVGENGTSDLGLNTELEEEEETRVVKDQETAELQKISDTLCGVEQGTSYSSRNLVSREDVLETCVVIDPPAQIEHVQGKSKAKANESGLSKLAMKAPKAVSETDKNSCAIDINKEFSENLEGEMICRICHLASGQPIEAMMVGTANNETSTDLIQLGCACKDELGIAHSHCAEAWFKLKGNRLCEICGETAKNVSESQVINHSFMEEWNESRFIDGGNSTSTGFFGRCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06157 293 MobiDBLite consensus disorder prediction 1 65 - -
Arst3g06157 293 Pfam RING-variant domain 181 223 IPR011016 GO:0008270
Arst3g06157 293 SUPERFAMILY RING/U-box 159 226 - -
Arst3g06157 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 235 IPR013083 -
Arst3g06157 293 PANTHER ZINC FINGER, RING-CH-TYPE 55 293 - -
Arst3g06157 293 ProSiteProfiles Zinc finger RING-CH-type profile. 154 230 IPR011016 GO:0008270
Arst3g06157 293 SMART ringv_2 161 224 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06157 Arst-Chr3 134648284 134650682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06157 157 292 C3H Transcription Factor Family AT5G05830 41.429 1.84e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06157 - - gmx:100791129 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06157 3 134648284 134650682 Arst3g06157 3 134648284 134650682 ECH
Arst3g06157 3 134648284 134650682 Arst10g00192 10 1765240 1767294 PCT