Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06156 ATGGCTCACCTTAAGGAACTGCCTGCTTCTGTTGTTAATGGGAATGATTCCCTCCCTGGTAATATAATATCCACTACAATTGGTGGAAAAGATGGGGAGCCCAAACAGACTATAAGTTACATGGCAGAACGTGTCGTGGGTACTGGGTCATTTGGAATCGTTTTCCAGGCAAAATGCTTAGAAAATGGGGAGGCAGTAGCCATCAAGAAAGTTTTACAGGACAAAAGATATAAGTGTCGTGAACTAGAGTTAATGCGCATAATGGATCATCCAAACATCATCTGTCTGAAGCATCATTTCTTTTCCACTACAAGTACTGGTGAGCTGTTCCTTAATTTGGTGATGGAATATGTTCCCGAGTCTATGTATCGAGTCTTGAAGTTCTATAGCACTGCTAACCAAAGAATGCCTCTTATCTATGTTAAACTTTATATGTACCAGATTTTCAGGGGGCTGGCTTATATCCACACTGTCCCTGGAGTATGCCACAGAGATTTGAAGCCACAAAATATACTGGTTGACCCTATTACACACCAGGTTAAGATATGTGATTTTGGAAGTGCAAAAGTGCTGGTCAAAGGAGAAACTAATATATCATATATATGTTCCCGGTTCTATCGCGCACCAGAACTCATATTTAGTGCTACTGAATATACTACTTCAATTGATATTTGGTCAGCTGGTTGTGTCCTTGCGGAACTGCTTTTGGGCCAGCCATTGTTTCCGGGTGAAAATGCAGTGGACCAGGTTGCAGAGATTTTCAAGGTCCTTGGCACACCCACTCGAGAGGAAGTCCGCTGCATGAATCCAAACTACAACAACTTTAGGTTTCCACAGATAAAAGCACACCCATGGCACAAGATATTCCACAAAAAGATGCCTCCTGAAGCAATTGATCTCACTTCCCGGCTTCTGCAGTATTCTCCTAGTCTCCGATGTACTGCACTAGAAGCTTGTGCACACCCATTCTTTGATGAACTTCGTGAACCCAATGCTCGCTTGCCAAATGGTCGTCCATTTCCACCACTATTCAACTTTAAGCAAGAGTTATCCACAGCACCTCCAGAGCTTGTTAACAAGTTGATCCCTGGCCACATGAAGCGGCAACTAGGGCTGCAACTTCCCCATTCTACAGGAACATGA 1143 0.4339 MAHLKELPASVVNGNDSLPGNIISTTIGGKDGEPKQTISYMAERVVGTGSFGIVFQAKCLENGEAVAIKKVLQDKRYKCRELELMRIMDHPNIICLKHHFFSTTSTGELFLNLVMEYVPESMYRVLKFYSTANQRMPLIYVKLYMYQIFRGLAYIHTVPGVCHRDLKPQNILVDPITHQVKICDFGSAKVLVKGETNISYICSRFYRAPELIFSATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQVAEIFKVLGTPTREEVRCMNPNYNNFRFPQIKAHPWHKIFHKKMPPEAIDLTSRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELSTAPPELVNKLIPGHMKRQLGLQLPHSTGT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06156 380 Gene3D Transferase(Phosphotransferase) domain 1 120 367 - -
Arst3g06156 380 CDD STKc_GSK3 35 327 IPR039192 -
Arst3g06156 380 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Arst3g06156 380 SMART serkin_6 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06156 380 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Arst3g06156 380 FunFam Shaggy-related protein kinase kappa 120 367 - -
Arst3g06156 380 FunFam Glycogen synthase kinase-3 beta 24 119 - -
Arst3g06156 380 Pfam Protein kinase domain 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06156 380 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 9 368 - -
Arst3g06156 380 SUPERFAMILY Protein kinase-like (PK-like) 39 352 IPR011009 -
Arst3g06156 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Arst3g06156 380 ProSiteProfiles Protein kinase domain profile. 40 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06156 Arst-Chr3 134642506 134646613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06156 44 340 MAP Kinase Gene Family AT3G59790 34.426 8.25e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Arst3g06156 Pkinase 5.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06156 K14502 - gmx:100779909 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06156 3 134642506 134646613 Arst4g03055 4 106524916 106529829 PCT
Arst4g03054 4 106524916 106529829 Arst3g06156 3 134642506 134646613 PCT
Arst4g00396 4 2940429 2946310 Arst3g06156 3 134642506 134646613 PCT