Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06152 ATGTTCTCTCCTCTCCCACCTGCCACGGTAACAACAACACTAGAACTCATGAAGCCCCTCTACAGATTCTTAATAGTAGCCATGGCGCTGTTTTCTGTGGTGGAATCTTCCAAATCTATATCTTCATGCAACACTGGCAGAAGTAGCGTAGAGCAGAGGCTGGTAGCAAAGGCTTTCAAGTCTGTATCTGGCTTCAACTCTTCGTCCTCCTGGTTCCGAAAAGGAGTATTACTTTCCAACTGTTCATCCCAATCTCATGTCATCAGCATAAACCTTCCATCCAAGAATCTCAGCGGAACCATCTCCTGGGGTTATCTCATCAACATCTCAAACCTCCAGCTTCTTGATCTCTCAGGGAATTCCTTACAAGGCCGTGTCCCAACTTGGTTATGGTCAACCTCATCCTTACGTCACCTAAACCTCTCCAACAACAGGTTTGGAGGTAGCGTCGTCTTCAGTACCACCGCCTTCATTCAAATGCTCAACCTCTCCCACAACAGGTTCACCAATTGGGTGGTCCAACACCACCAATATCAACGCTACTCTTCCTTCTTCCCAAACCTTAAAATCCTTGACCTCTCTCACAACCACTTAAGGACACCCCTCCCTTCAGGCTTCACCAACCTCACCAACCTTCAATACCTTGACTTATCGAACAACAACCTCACCGGAACTTTCCCTTCCGATTTTCCTCCACTCAACAACCTCCACTTCCTAAACATCTCCTTCAACCGCTTCAACTCAACCGTTAGCCTCAACAAGTTCAACAAATTCGGCAAAGCCGCCTTTATCCACGCTGGCAAGAATTTCACCTACACCGCCATTACTCCAATTCACAGCAACAACCATTCCGCAACTACCACCCCAGCCTCACAAGCCATTCACACAAGATACAAACACAAACACAAACACAAGACACACATTATTATCGCGGTTTCGTGTGCTTCTTCGTTAGCGGTTATTTTTATCATTTGGGCGCTACTACGCGTTGCTAGGAAGAAGAAGAAAGAGCGTTGCAAGATTAAGAAATGGGCAATATCGAAAGCGGAGGACATGATGAGCGGCGTGACGGTGGAGAAATCAGGGCCGTTCGAGTTCGAGACTGAGTCAGGGTCCACGTGGGTGGCTGATCTGAAGGAACCATGTTCTGCGGCCGTGGTGATGTTCGAGAAGCCGTTGATGAGCCTGACCTTCAGGGACCTCATCGCTGCCACGTCACACTTCGGGAAGGAGTCACTCCTAGCGGAAGGCAGGTGTGGACCCCTCTACAGGGCTGTACTCCCCGGCGATCTCCACGTGGCAATCAAGGTACTGGAATACGCCAGGGACGTTGATCCTCGTGACTCCATTGCAATGTTCGTTGACCTCTCAAAGCTCAAGCACCCAAATTTGTTGCCCCTCTCTGGTTACTGCATTGCAGGTAAGGAGAAGCTGGTACTGTACGAGTTTATGGCAAACGGCGATTTGGGGAGGTGGCTACACGAGCTTCCAACGGGGGACACCAACGTGGAGGACTGGACACGCGACACGTGGGAGATTCAAAACGGCGTCGTTGAGGGGTCATCAGAGAAAATGGGGTGGCTAACACGTCACCGTATTGCGGTTGGGATAGCGCGTGGACTAGCTTACCTTCACCACGCGGGTTCCAAACCCGTCGTGCACGGCCACCTCGTTACCTCCAACATTCTACTCGCCGACGACTTCGAGCCACGAATATCGGATTTCGGGCTGCGGGGAGAACCGAATCCGAATTGCGGGACGGAGGGTGACGTGTACTGCTTCGGGATGGTGCTGATGGAGATGTTGACAGGGAAGACAGGGTCGGAGGAAACGGTGAGCGCGGTGAGGAAGGCGGTGAGGGAAGGGGAGGGGGTTAGGGTTCTGGAGGAGAGGCTGCGAGTGGGCGGTGAGTGGGAGAGTGAGATGGTGGAGAGCCTCCGAGTGGCGTACCTTTGCACAGCTGAGTCGCCTTCCAAGAGGCCCACTATGAGGCAGGTTTTGGGCTTGCTCAAAGACATTAGTCCAAACCAACCACTCACCCCGAGTTGA 2049 0.5183 MFSPLPPATVTTTLELMKPLYRFLIVAMALFSVVESSKSISSCNTGRSSVEQRLVAKAFKSVSGFNSSSSWFRKGVLLSNCSSQSHVISINLPSKNLSGTISWGYLINISNLQLLDLSGNSLQGRVPTWLWSTSSLRHLNLSNNRFGGSVVFSTTAFIQMLNLSHNRFTNWVVQHHQYQRYSSFFPNLKILDLSHNHLRTPLPSGFTNLTNLQYLDLSNNNLTGTFPSDFPPLNNLHFLNISFNRFNSTVSLNKFNKFGKAAFIHAGKNFTYTAITPIHSNNHSATTTPASQAIHTRYKHKHKHKTHIIIAVSCASSLAVIFIIWALLRVARKKKKERCKIKKWAISKAEDMMSGVTVEKSGPFEFETESGSTWVADLKEPCSAAVVMFEKPLMSLTFRDLIAATSHFGKESLLAEGRCGPLYRAVLPGDLHVAIKVLEYARDVDPRDSIAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWTRDTWEIQNGVVEGSSEKMGWLTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRISDFGLRGEPNPNCGTEGDVYCFGMVLMEMLTGKTGSEETVSAVRKAVREGEGVRVLEERLRVGGEWESEMVESLRVAYLCTAESPSKRPTMRQVLGLLKDISPNQPLTPS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06152 682 ProSiteProfiles Protein kinase domain profile. 408 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06152 682 FunFam Putative LRR receptor-like serine/threonine-protein kinase 369 483 - -
Arst3g06152 682 Gene3D Phosphorylase Kinase; domain 1 368 483 - -
Arst3g06152 682 Pfam Leucine rich repeat 96 146 IPR001611 GO:0005515
Arst3g06152 682 Pfam Leucine rich repeat 186 246 IPR001611 GO:0005515
Arst3g06152 682 Pfam Protein tyrosine and serine/threonine kinase 412 578 IPR001245 GO:0004672|GO:0006468
Arst3g06152 682 SUPERFAMILY Protein kinase-like (PK-like) 398 675 IPR011009 -
Arst3g06152 682 SMART LRR_typ_2 109 133 IPR003591 -
Arst3g06152 682 SMART LRR_typ_2 209 232 IPR003591 -
Arst3g06152 682 SMART LRR_typ_2 185 208 IPR003591 -
Arst3g06152 682 ProSiteProfiles Leucine-rich repeat profile. 211 232 IPR001611 GO:0005515
Arst3g06152 682 PRINTS Leucine-rich repeat signature 112 125 - -
Arst3g06152 682 PRINTS Leucine-rich repeat signature 209 222 - -
Arst3g06152 682 Gene3D Ribonuclease Inhibitor 155 312 IPR032675 -
Arst3g06152 682 Gene3D Transferase(Phosphotransferase) domain 1 581 679 - -
Arst3g06152 682 Gene3D Ribonuclease Inhibitor 50 154 IPR032675 -
Arst3g06152 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 70 674 - -
Arst3g06152 682 SUPERFAMILY RNI-like 74 248 - -
Arst3g06152 682 Gene3D Transferase(Phosphotransferase) domain 1 484 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06152 Arst-Chr3 134614895 134617571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06152 87 673 Receptor kinase-like Gene Family AT5G07280 30.577 1.19e-72 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Arst3g06152 PK_Tyr_Ser-Thr 2.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06152 - - gmx:100788556 791.956