LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g06151	ATGGCTGAGGCAGTGGTGGTTCCCAACAAGAACAAGGAGAGCAGCCTCCTCCTGGGCCGCTTCGAGATAGGAAAGCTCCTGGGCCACGGAACCTTCGCGAAGGTGTACCACGCGCGCAACATCAAGACCGGTGAGGGCGTCGCCATCAAGGTCATCGACAAGGAGAAGATCCTCAAGAGCGGCCTCGTCTCCCACATCAAGCGCGAGATCTCCATCCTCCGCCGCGTCCGCCACCCTAACATCGTCCAGCTCTTCGAAGTCATGGCCACCAAATCCAAGATCTACTTCGTCATGGAGTACGTCCGCGGCGGCGAGCTCTTCAACAAGGTCGCCAAAGGCCGCCTCAAGGAAGACCTCACTCGAAAGTATTTCCAGCAACTCATCTCCGCCGTCTCCTTCTGCCACAACAGAGGCGTCTTCCACCGCGACCTCAAACCGGAGAATCTCTTGCTGGACGAGAACGGCGACCTTAAGGTCTCCGATTTCGGCCTGAGCGCCGTTTCTGATCAGATTAGGCAGGATGGCTTGTTCCACACCTTTTGCGGAACCCCTGCTTACGTGGCACCTGAGGTTCTTGCGAGGAAGGGTTACGACGCAGCGAAGGTTGATATCTGGTCTTGTGGCGTCGTTTTGTTCGTTCTGATGGCTGGCTATTTACCTTTCCATGATCGCAACGTTATGGCTATGTATAAGAAGATCTACAAGGGCGAGTTTCGCTGTCCTAGGTGGTTTTCCCCCGAATTGTCCAGGCTTGTTGCTAAGCTTCTTGATACTAATCCTGACAGGAGGATTTCCATTCCCGACATCATGGAGAATCGCTGGTTCAAGAAAGGCTTTAAGCAGATTAAGTTCCATATTGAGGATGACAATAAGGTTGTTCAGCACGTTGCTGGTGGTGGTAATGATGCTGATTCTTCATCTGATTTGTCAGAAACAGATGAGTTTGAGGCCGAGGAAAGTGCCAGGAGGAGGAGGAGGAACAGCGCTTTGTTGCCGCGGCCGGCGAGTTTGAATGCGTTTGATATCATATCGTTTTCTCCTGGTTTTGATCTCTCTGGCTTGTTTGAGGAGAAGGGTGACGAGGCGAGGTTTGTTTCCGGTGCGCCGGTTTCCAAGATCATATCGAAATTGGAGGAAATTGCTCAGTTGGTGAGCTTCACGGTGAGGAAGAAGGACTGCAGGGTAAGTTTGGAAGGTTCCAGAGAAGGCGTGAAGGGGCCACTTACCATTGCTGCTGAGATTTTTGAGTTGACGCCTTCTTTGGTTGTGGTGGAGGTGAAGAAGAAAGGAGGGGATAGAGAGGAGTATGAGAGGTTCTGCAACACTGAATTGAAGCCAGGGTTGCAGAATTTGACGGTTGAGGACGAATCCCAACCTCAGTCTCACTCAGAAACTGCAACTGCATCTTCTTCGCCATTACCTTCACCCACTGATGAACTCTCTCAACTGCGTACGCTTTCTGACTCTGCAATCCACTTACCTTCTGAACTTGAATCTTTGAACCTAGATACATGA	1515	0.5142	MAEAVVVPNKNKESSLLLGRFEIGKLLGHGTFAKVYHARNIKTGEGVAIKVIDKEKILKSGLVSHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVRGGELFNKVAKGRLKEDLTRKYFQQLISAVSFCHNRGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKVDIWSCGVVLFVLMAGYLPFHDRNVMAMYKKIYKGEFRCPRWFSPELSRLVAKLLDTNPDRRISIPDIMENRWFKKGFKQIKFHIEDDNKVVQHVAGGGNDADSSSDLSETDEFEAEESARRRRRNSALLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIAQLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDREEYERFCNTELKPGLQNLTVEDESQPQSHSETATASSSPLPSPTDELSQLRTLSDSAIHLPSELESLNLDT	504

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g06151	504	SMART	serkin_6	21	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g06151	504	MobiDBLite	consensus disorder prediction	449	481	-	-
	Arst3g06151	504	CDD	STKc_SnRK3	20	274	-	-
	Arst3g06151	504	FunFam	Non-specific serine/threonine protein kinase	11	320	-	-
	Arst3g06151	504	Gene3D	Transferase(Phosphotransferase) domain 1	11	331	-	-
	Arst3g06151	504	FunFam	Non-specific serine/threonine protein kinase	334	452	-	-
	Arst3g06151	504	ProSitePatterns	Protein kinases ATP-binding region signature.	27	50	IPR017441	GO:0005524
	Arst3g06151	504	Pfam	NAF domain	334	390	IPR004041	GO:0007165
	Arst3g06151	504	ProSiteProfiles	Protein kinase domain profile.	21	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g06151	504	ProSiteProfiles	NAF domain profile.	332	356	IPR018451	GO:0007165
	Arst3g06151	504	CDD	CIPK_C	338	449	-	-
	Arst3g06151	504	SUPERFAMILY	Protein kinase-like (PK-like)	17	276	IPR011009	-
	Arst3g06151	504	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	139	151	IPR008271	GO:0004672\|GO:0006468
	Arst3g06151	504	Pfam	Protein kinase domain	21	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g06151	504	MobiDBLite	consensus disorder prediction	297	327	-	-
	Arst3g06151	504	Gene3D	Kinase associated domain 1, KA1	334	453	-	-
	Arst3g06151	504	FunFam	Non-specific serine/threonine protein kinase	12	100	-	-
	Arst3g06151	504	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	11	446	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g06151	Arst-Chr3	134598345	134600405	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g06151	10	478	CBL-interacting serine-threonine protein kinases	AT4G18700	76.681	0.0	739

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Arst3g06151		Pkinase	2e-74	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g06151	-		-	gmx:100790133	749.969