Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06142 ATGTCAGAGGGATTTGAGATTCATCAAGAGAATAATGAAGGAAGTGGTGGCGGCAAGAGTAGTAATGATAATGAGGGTGAGGAAAATTCATTTGACTTGAATGAAGGAGCGGCTATGATGAGTAGTGATGAGGAATTGGAAGAAGAGAATAATAATGAAGAAGAAGGGAATTCAACAAATCCAAGTAGCAGCAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAGACAATATGTGAGATCAAAGATGCCAAGGCTTCGTTGGACTCCTGATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGGAGGTCAAGAAAGAGCAACACCTAAATTGGTGCTTCAGCTAATGAATGTCAGAGGCCTAAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGACTCTGGCCAAGTAGTAAGAAGTGAAAGACAGAGAAGCAAGCATGAAGTAGGTGGTGTGGCGTATGAGACGATGATGAAGAGGAGTAGTCCTCATCAACATTTCAAGATGGGAAACGGTGGAATTTTTCTTACTACTAACTACACCACCACCACTACTCCATTCTCCTCCCTCCCACATTCTTCAAAGCCCACAAACCACCACCTATGGCACTTGAATCATCAAATACCTTCTATTAGAAGACCAATAACACCACCGTTGCAAACTCAACTAGCCAGCAGAATTACTCCCATGAGACCAAGCCGATTTCTTGAAGAGAAAAAGTGGCCTCCTTTTCATCACTGGAAATTCAAAAGGCTTCCTAATACCAACAACATTACACTACCCTCATCACATTCCTCTCCATTCGCCACCACCTCTGACTTCATCACCTTTGGAGACAACACCACCACAACAATCAGAGACTATCTATCAAACTCCAATACTTTCAAGTTGAATCATCAAGACAAGCAGTTGCAGCACAAAGAGAAGCAATGGGTTCCAGATTTGCAACTGGGTTTGAGTCATCACAAAGATGGAGACAACAATGATGGCACAGGAACCCCAGAAATTAGCACTAAACTTTCACTTTCATAG 1065 0.43 MSEGFEIHQENNEGSGGGKSSNDNEGEENSFDLNEGAAMMSSDEELEEENNNEEEGNSTNPSSSSTASREGKRGSGVRQYVRSKMPRLRWTPDLHLSFVHAVQRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDSGQVVRSERQRSKHEVGGVAYETMMKRSSPHQHFKMGNGGIFLTTNYTTTTTPFSSLPHSSKPTNHHLWHLNHQIPSIRRPITPPLQTQLASRITPMRPSRFLEEKKWPPFHHWKFKRLPNTNNITLPSSHSSPFATTSDFITFGDNTTTTIRDYLSNSNTFKLNHQDKQLQHKEKQWVPDLQLGLSHHKDGDNNDGTGTPEISTKLSLS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06142 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 142 IPR017930 -
Arst3g06142 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 57 176 IPR046955 GO:0003700
Arst3g06142 354 Gene3D - 85 142 - -
Arst3g06142 354 MobiDBLite consensus disorder prediction 1 84 - -
Arst3g06142 354 MobiDBLite consensus disorder prediction 329 354 - -
Arst3g06142 354 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 141 IPR006447 GO:0003677
Arst3g06142 354 SUPERFAMILY Homeodomain-like 84 140 IPR009057 -
Arst3g06142 354 Pfam Myb-like DNA-binding domain 88 138 IPR001005 -
Arst3g06142 354 MobiDBLite consensus disorder prediction 1 24 - -
Arst3g06142 354 MobiDBLite consensus disorder prediction 55 72 - -
Arst3g06142 354 FunFam Myb family transcription factor 84 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06142 Arst-Chr3 134563738 134567336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06142 77 147 G2-like Transcription Factor Family AT2G42660 81.690 2.70e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst3g06142 Myb_DNA-binding 7.4e-07 CL0123