Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06115 ATGGGTTTCTCATTCTCTCTCAACTCTCTTGCGGGTAAAGCAAAGCAATCTCTAACACCAAACACCAATGCCGTGTGGGAAAAGATGGCAACTTTAGTTGAGCCTCCTAACAAAATTAAGCCAAAGGGAAAGCATTATTATACAATATGGCAAACATTGTTCGAGATTGATACCAAGTACATTCCAATCAAGCCGATTGGTCGAGGTGCATATGGCGTGGTTTGCTCTTCCATCAATAGGGAGACTAATGAGAAGGTGGCAATCAAGAAGATTGGCAATATCTTTGATAACTGTATTGATGCGCTGAGGACTTTGAGAGAGGTGAAGCTGCTAAGGCATATCCGGCACGAGAATGTCATTGCTTTGAAGGATGTGATGATGCCAATCCAGAGGACGAGCTTTAAGGATGTTTACTTGGTCTATGAACTCATGGATACAGATCTTCACCAAATTATTAAGTCTTCGCAGCCACTCTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTGCTTCGAGGTCTCAAATACCTTCATTCTGCGAATATTCTGCACCGGGACTTGAAACCTGGAAATCTGCTGGTTAATGCCAATTGTGATTTGAAGATATGTGACTTTGGCCTTGCGCGAACCAATGGAGCTGAGGGCCAGTTCATGACAGAGTATGTTGTCACCCGCTGGTATCGGGCTCCAGAGCTCCTGCTTTGCTGTGAAAACTATGGAACCTCTATTGATGTATGGTCAGTGGGATGCATTTTTGCTGAGATTCTTGGAAGAAAGCCAATCTTCCCAGGAAGTGAGTGCCTCAACCAGCTGAAACTGATCATAAGTGTACTTGGAAGCCAGCAAGAGTCTGATCTTGCATTTATTGATAACCAGAAGGCTAGGAGGTTTATCAGATCACTGCCGTATACAAGGGGTAGACCCTTTGCTCAACTATTTCCACAAGCCGACCCATTAGCAATTGATTTGTTGCAAAAGATGCTAGTATTTGATCCAACTAAGAGAATTTCTGTCTTAGAAGCACTCCAGCATCCGTATATGGCTGGCCTGTATGATCCAAGACTTAACCCTCCTGCTCAAGTTCCAGTCAATCTTGACATAGACGAAAACTGGGGCGAAGAGATGATTAGAGAAATGATGTGGAATGAGATGCTTCAGTATCATCCTGAAGCTGCTTCTGCCAATGTTTGA 1191 0.4341 MGFSFSLNSLAGKAKQSLTPNTNAVWEKMATLVEPPNKIKPKGKHYYTIWQTLFEIDTKYIPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFDNCIDALRTLREVKLLRHIRHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTNGAEGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGSECLNQLKLIISVLGSQQESDLAFIDNQKARRFIRSLPYTRGRPFAQLFPQADPLAIDLLQKMLVFDPTKRISVLEALQHPYMAGLYDPRLNPPAQVPVNLDIDENWGEEMIREMMWNEMLQYHPEAASANV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06115 396 ProSitePatterns MAP kinase signature. 95 198 IPR003527 GO:0004707|GO:0005524|GO:0006468
Arst3g06115 396 CDD STKc_TEY_MAPK 54 389 - -
Arst3g06115 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 60 360 - -
Arst3g06115 396 FunFam Mitogen-activated protein kinase 144 373 - -
Arst3g06115 396 FunFam Mitogen-activated protein kinase 46 154 - -
Arst3g06115 396 SUPERFAMILY Protein kinase-like (PK-like) 52 354 IPR011009 -
Arst3g06115 396 SMART serkin_6 60 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06115 396 Pfam Protein kinase domain 63 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g06115 396 Gene3D Transferase(Phosphotransferase) domain 1 144 373 - -
Arst3g06115 396 Gene3D Phosphorylase Kinase; domain 1 47 383 - -
Arst3g06115 396 ProSitePatterns Protein kinases ATP-binding region signature. 66 90 IPR017441 GO:0005524
Arst3g06115 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Arst3g06115 396 ProSiteProfiles Protein kinase domain profile. 60 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06115 Arst-Chr3 134405690 134408691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06115 29 395 MAP Kinase Gene Family AT2G18170 83.651 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Arst3g06115 Pkinase 3.1e-69 CL0016