Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06066 ATGGCATCAAGTAGCACAAGACCCAAATATGACGTGTTTGTGAGCTTCAGAGGTGAGGACGTACGCAACACCTTCGCTGATCATCTCTTTGCCGCTTTCCGTAGAAACGGAATAGTTGCATTTAGAGACGATAGGAATCTGATGCAAGGACAGCACATCTCCACTGAGCTGGTGCAAGCAATTGAAGGATCTCAGGTTCTCATTGTCATCTTCTCTAAGAACTATGCTACCTCTTCATGGTGCTTGCAGGAACTCGCTAAGATGCTTGATTGCAGCAATACGATAACAGAACCAAATCTGTTGCCTATTTTCTACGATGTGAGTCCGTCTGAGGTGCGTAAACAGACCGGAGACTATGGGAAAGCGTTGGCTGAGCATGAAGAAAGATTCAAACATAACTCAAAGATGGTGCAACAATGGAGGGAATCTCTGCTGCAAGTCGCCAATCTCTCTGGTTGGGATATACAAAATAAGCAGGAGAATGGAGAGATTGAAAAAATTGTTAAGAGGGTGAGAAGCAAATTAGGTTGCAATTCGTTAAGTGTGGATGGGTTGGTTGGGATGCAATCTCGTGTGGAGGAATTGGAAAACCTGATTGATTTCAACTCCGATAATGAAGTTCGGGTTGTAGGCGTTTGTGGCATGGGTGGGATAGGAAAGTCAACACTTGCTAGGGTCGTGTATGGTAGAAACCTTCATAAATTTGGTGCTCATTGTTTTGTTGATGATATAAGCAAAGTTTTTCGTGATGCGGGTGGTCTATCTTCTCTACAAAAGCAACTTGTTTGTCAAATTACAAATGGAGAGATCCAAGATATATACAATCATTACGAAGCTAAGAGTTTGATGAAAACTATGCTACGTTGTCAAAAGGCTCTGATTGTTCTAGATAATGCCGAAGAAGTTGAACAGTTAGAGAAGCTTGGCGTGACTCGTGATTGTCTATGTCCAGGAAGCAGAATTGTAGTAACTTCTAGAGATCAACATGTCTTGAACTCTTTTGGGCTAGATCAAACATACAAAGTTCAACTCTTGAATGACGATGAAGCTCATCAATTGTTTTGTGAAAAAGCTTTTGATGATAATATAATTATGAGTTGTGACGAGATTAGCAGAGAGTACAAAAAGTTGACGGATCTTGCACTTAAATATGCTCAAGGCCTTCCCTTGGCAGTTAAAGGTTTGGGGTCATATCTACGCGGTCGAGATATCTCTGTATGGAGAAGTGCCTTAGATAGACTGAAAAATAATCCAAAGAAGGAAATCGCAGATGTGCTTCAACTTAGTTTTGATGGATTGGAACCCCTCGAAAAGGAAATATTTTTGGATATCGCTTGTTTCTTTAACCACCAAATGGATTATCGTGTGGAAGACATGTTGTACTGTCGTGGTCTTCATCCAAAGATTGGAATAAGTGTACTCATCGATAAATCATTAATAACAATTGATGGATTCTATATTAGAATGCATGACCTGTTTGCAAGAGTTAGGCATGAGAATAGTTCGGCAAAGTGCTCCAAATGA 1524 0.4062 MASSSTRPKYDVFVSFRGEDVRNTFADHLFAAFRRNGIVAFRDDRNLMQGQHISTELVQAIEGSQVLIVIFSKNYATSSWCLQELAKMLDCSNTITEPNLLPIFYDVSPSEVRKQTGDYGKALAEHEERFKHNSKMVQQWRESLLQVANLSGWDIQNKQENGEIEKIVKRVRSKLGCNSLSVDGLVGMQSRVEELENLIDFNSDNEVRVVGVCGMGGIGKSTLARVVYGRNLHKFGAHCFVDDISKVFRDAGGLSSLQKQLVCQITNGEIQDIYNHYEAKSLMKTMLRCQKALIVLDNAEEVEQLEKLGVTRDCLCPGSRIVVTSRDQHVLNSFGLDQTYKVQLLNDDEAHQLFCEKAFDDNIIMSCDEISREYKKLTDLALKYAQGLPLAVKGLGSYLRGRDISVWRSALDRLKNNPKKEIADVLQLSFDGLEPLEKEIFLDIACFFNHQMDYRVEDMLYCRGLHPKIGISVLIDKSLITIDGFYIRMHDLFARVRHENSSAKCSK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06066 507 Pfam TIR domain 9 174 IPR000157 GO:0007165
Arst3g06066 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
Arst3g06066 507 Gene3D - 345 434 IPR042197 -
Arst3g06066 507 Gene3D - 3 181 IPR035897 -
Arst3g06066 507 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 499 IPR044974 GO:0006952
Arst3g06066 507 PRINTS Disease resistance protein signature 209 224 - -
Arst3g06066 507 PRINTS Disease resistance protein signature 385 399 - -
Arst3g06066 507 PRINTS Disease resistance protein signature 286 300 - -
Arst3g06066 507 Gene3D - 182 344 IPR027417 -
Arst3g06066 507 Pfam NB-ARC domain 191 420 IPR002182 GO:0043531
Arst3g06066 507 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
Arst3g06066 507 SMART till_3 9 150 IPR000157 GO:0007165
Arst3g06066 507 SUPERFAMILY "Winged helix" DNA-binding domain 421 494 IPR036390 -
Arst3g06066 507 ProSiteProfiles TIR domain profile. 8 175 IPR000157 GO:0007165
Arst3g06066 507 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06066 Arst-Chr3 134060098 134061772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06066 186 496 WRKY Transcription Factor Family AT5G45050 34.494 5.09e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06066 - - adu:107482285 1016.14