Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06062 ATGCGGTTCTATCCAGGCTTAACCATCACACCCACCGATCACCGCTTCTGCGTCCCAACCGCCACAAATCCCGTCTCTCTAAGGCCCATTATCGGCCCAATCAAATGCCCAAACCGAGTCACCTTCTCCTTCAAGAAGCCCAGGGCCACCCTCAACGGCGCTGCTGCCACCGAGGATAAGCCAGCGACGGCGGTTGCGGACCTGAGCTTCTACGAGCTTCTAGGGATTTCAGAATCGGGGTCGCTGATGGAGATAAAGCAAGCGTACAAGCAACTCGCAAGAAAGTACCACCCGGATGTGTCTCCACCGGGTCGGCTCGAAGAGTACACGAAGCGGTTCATTCGGGTCCAAGAGGCTTACGAAACCCTCTCGGATCCCACTAGGAGAGCCATGTATGATAACGACATGGCTAGGGGAGTTCACTTCGCCTTCAATGCTCGTCGAAGTTACCACCACCGTGATCAGGTGGTTGAACATAAGAGCGAGTGGAAATCTCGTTGGCAATCACAACTTTCTGAGCTGAAAAGAAGAAGTAGGAGCAAGAGCAAGGATGAAGGGAAGAACATGTCATGGGCAGCAAGAATGCGCCAACAAAGAAATGAATCATCAGATGAATCATGA 621 0.525 MRFYPGLTITPTDHRFCVPTATNPVSLRPIIGPIKCPNRVTFSFKKPRATLNGAAATEDKPATAVADLSFYELLGISESGSLMEIKQAYKQLARKYHPDVSPPGRLEEYTKRFIRVQEAYETLSDPTRRAMYDNDMARGVHFAFNARRSYHHRDQVVEHKSEWKSRWQSQLSELKRRSRSKSKDEGKNMSWAARMRQQRNESSDES 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06062 206 CDD DnaJ 70 125 IPR001623 -
Arst3g06062 206 Pfam DnaJ domain 70 133 IPR001623 -
Arst3g06062 206 SUPERFAMILY Chaperone J-domain 66 143 IPR036869 -
Arst3g06062 206 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 55 203 - -
Arst3g06062 206 FunFam Chaperone protein dnaJ 20, chloroplastic 55 165 - -
Arst3g06062 206 Gene3D DnaJ domain 57 171 IPR036869 -
Arst3g06062 206 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Arst3g06062 206 SMART dnaj_3 68 128 IPR001623 -
Arst3g06062 206 PRINTS DnaJ domain signature 108 128 IPR001623 -
Arst3g06062 206 PRINTS DnaJ domain signature 71 89 IPR001623 -
Arst3g06062 206 PRINTS DnaJ domain signature 89 104 IPR001623 -
Arst3g06062 206 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Arst3g06062 206 MobiDBLite consensus disorder prediction 172 206 - -
Arst3g06062 206 MobiDBLite consensus disorder prediction 172 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06062 Arst-Chr3 134022458 134024585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06062 71 133 C2H2 Transcription Factor Family AT1G74250 46.970 1.33e-08 52.4