Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06010 ATGGCAACCGGTGATGATTACAATATTGATGATTTGTTTCAAGAAGCTCAAAGCAGATGGCTGAAGCCTGTGGAAGTGATGTACATTTTACAGAATCATGACAAGTACCAGTTCACACAAGAGCCCCCTCAACAACCAACAAGTGGATCACTTTTTCTCTTTAACAGAAGAGTCCTGCGCTTCTTTCGTAGAGATGGCCATAACTGGCGCAAGAAGAAAGACGGAAGGACTGTCGGAGAGGCACACGAACGCCTTAAGGTTGGAACTGTCGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGCATTTGAGCATATTGTTCTTGTGCATTATAGAGAAACAAGTGAGGGAAGGTCCAGCTCTGGACCTGGCACACAATTGTCACCAAGTTCCTCTTCTGCATTTGGCCAGAGTCCTAGCTCATATTCTGCTCAGACACCATTGTCAACATCTGTACTTGGTGATCCATATGAACCTAATCAGAGTTACTCTAGTTCTGGCACCGGAGAAGTTACCTCTGATGTATTCATCATGAATGATGGAATGAGTCACCTGGATGGGACATATGCAGACTCAGGAACTTCAACTGAAGTTGAGGTTACTCGAGCTTTGTTGCGCAGATTGGAGGAGCAGTTAAGTTTGAATGAAGACAGCATCAAAGAAATTGCTTCCTTCTACGGTGAGAAAGAAATTACAGGTGATTCAAATGCTCAACAAAATCAAGGGTTGACCTGTAAGCAAGAGGAATCTGCAGCTTTTGCTAGACCAGATGATTATGGGCTAATTTTTTATGGACATAATGGAACCCAAGATGAAGGTGATAAGTCTTATGAATTAATGGACCATACATACCGTGATGGAAATGAAAAGGATATATGGACAGAGGTGCTGGAATCATGCAAGTCGTCATCCACAGCCAGGTTACCACAGAAAAATGTATACATGCCAGCCGGAAAAGAAAATTCACCTTCTTCGTCAAGAAAGGAACCAATTGCCAATCAGGATGATAGTCACTGGCTAAACTTCAACAGTAATAACACAGAAAACTCTGTTTTCTCACTACCTGAAGGTGATAGTGGAGTTGAATATCCCCCATATTCTTCTGTGCTAGAGGCACAAAAAGCTAATTCTGAGTACTATGCAACATTGTTTGCCCAAAGCCAAATTGGACCATCTCTGGATGCAGACTCAAGCTTGACTGTCTCACAAAAACAGAAATTTTCTATTAAGGCAGTCTCCCCAGAATGGGGTTATACCACTGAGACTACTAAGATCATCATTGTTGGGTCTTTTCTGTGTCATCCTTCAGATTCTGCCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCCATTGAGATAATTCAGGACGGTGTAATCAGTTGTGAAGCTCCATCTCGCCTTTCTGGAAAGGTTAATCTCTGCATTACTTCTGGTAATAGGCAGTCCTGCAGTGAAGTCAGAGAGTTTGAGTATCGTAATAAGACAAGTATTTGCACTTACTGTAACTCATCGGCAACAGAAGCCAACAGAAGTCCAGAAGAGCTGCTGTTACTCGTTAGATTTGCACAGATGCTGCTTTCTGGTTCAACTACAAAGAATGATGACATAGAATCTGGAACTCATCTAGTAAAACAGAAAGCCGATGATGATTCATGGAGCCATATTATAGAGGCTCTTCTAGTGGGCAGTGGAACTTCATCTGGTATGGTCGATTGGCTTCTCGAAGAGCTTCTTAAGGATAAGCTGCAGCTGTGGCTTTCTTGCAGGTCCCAGGAGAAAGATGAAGTAACAGGCTGTTGTTTGTCGAAGAAAGAGCAGGGAATCATTCACATGCTAGCTGGATTGGGTTTTGAGTGGGCCTTGCACCCTATTCTCAGTTGTGGTGTGAATATAAATTTCCGTGACATTAACGGATGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGAGAAAAAATGGTTGCTTCACTTATAGCTTGTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCGAAAGGAAAAACTGCTGCATCTATTGCAGCGAGCAGTGGACATAAGGGACTGGCAGGATATCTTTCTGAGAGAGCTCTGACAAGCCATCTGTCATCCCTCACACTGCAAGAGAGTGAGCTATCCAAAAGTTCTGCACAATTCGAAGCAGATTTAGCTGTTAGTAGTGTCTCCAAGGAAAATCTCGCTGCCGGTGAGGATCAGGCTCCACTTAAACATACCTTGGCTGCTGTCAGAAATGCAACTCAGGCCGCAGCACGTATACAATCTGCTTTTCGTTCGCATTCCTTCAGAAAGCGGAGAGCAAGAGAAGCTGCTGCTGCCACTGCTGGTGGTATCAACGCAGGTAGCATTGGTAACATTCCGGAGCTTTCCGCAATGTCAAAACTTGCCTTTCGGAACTCACGGGATCACAATTCTGCTGCCTTATCTATTCAGAAGAAATTTCGAGGTTGGAAGGGTCGCAAAGATTTCTTAGAATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGAAAGCATTACAAGGTGATATGGGCAGTTGGAATCTTGGACAAGGTTGTCCTGCGATGGCGGAGAAAAGGAGCTGGCCTACGAGGTTTCCGACAGGAGATGGAGACCAGTGCCTTGGATGAAAGTGAAGATGAAGATATTCTCAAGCCTTTTCGCAAACAGATGGTAGATGCAGAAATAAAAGAGGCCGTGTCAAGGGTGCTTTCCATGGTTGATTCTCCAGATGCTCGTCAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCTAAGGCTGAACTTGCGGGTACGAGTGAGGAAGCATCATTGTCAACGTCCATTGCGGATGTTTTCAGTATGGAAGATGATATGTATCAGTTTCCTCAGGGCTAA 2970 0.4438 MATGDDYNIDDLFQEAQSRWLKPVEVMYILQNHDKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGTVEALNCYYAHGEQNPTFQRRSYWMLDPAFEHIVLVHYRETSEGRSSSGPGTQLSPSSSSAFGQSPSSYSAQTPLSTSVLGDPYEPNQSYSSSGTGEVTSDVFIMNDGMSHLDGTYADSGTSTEVEVTRALLRRLEEQLSLNEDSIKEIASFYGEKEITGDSNAQQNQGLTCKQEESAAFARPDDYGLIFYGHNGTQDEGDKSYELMDHTYRDGNEKDIWTEVLESCKSSSTARLPQKNVYMPAGKENSPSSSRKEPIANQDDSHWLNFNSNNTENSVFSLPEGDSGVEYPPYSSVLEAQKANSEYYATLFAQSQIGPSLDADSSLTVSQKQKFSIKAVSPEWGYTTETTKIIIVGSFLCHPSDSAWACMFGDVEVPIEIIQDGVISCEAPSRLSGKVNLCITSGNRQSCSEVREFEYRNKTSICTYCNSSATEANRSPEELLLLVRFAQMLLSGSTTKNDDIESGTHLVKQKADDDSWSHIIEALLVGSGTSSGMVDWLLEELLKDKLQLWLSCRSQEKDEVTGCCLSKKEQGIIHMLAGLGFEWALHPILSCGVNINFRDINGWTALHWAARFGREKMVASLIACGASAGAVTDPSAQDPKGKTAASIAASSGHKGLAGYLSERALTSHLSSLTLQESELSKSSAQFEADLAVSSVSKENLAAGEDQAPLKHTLAAVRNATQAAARIQSAFRSHSFRKRRAREAAAATAGGINAGSIGNIPELSAMSKLAFRNSRDHNSAALSIQKKFRGWKGRKDFLELRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRQEMETSALDESEDEDILKPFRKQMVDAEIKEAVSRVLSMVDSPDARQQYHRMLEKYRQAKAELAGTSEEASLSTSIADVFSMEDDMYQFPQG 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06010 989 Gene3D - 827 875 - -
Arst3g06010 989 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Arst3g06010 989 Pfam Ankyrin repeats (3 copies) 639 713 IPR002110 GO:0005515
Arst3g06010 989 FunFam Calmodulin-binding transcription activator 2 417 510 - -
Arst3g06010 989 SMART CG_1_2 12 130 IPR005559 GO:0003677
Arst3g06010 989 Gene3D Immunoglobulins 416 511 IPR013783 -
Arst3g06010 989 ProSiteProfiles IQ motif profile. 827 856 IPR000048 GO:0005515
Arst3g06010 989 SMART ANK_2a 691 720 IPR002110 GO:0005515
Arst3g06010 989 SMART ANK_2a 652 681 IPR002110 GO:0005515
Arst3g06010 989 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Arst3g06010 989 MobiDBLite consensus disorder prediction 130 185 - -
Arst3g06010 989 CDD IPT 423 507 - -
Arst3g06010 989 FunFam Calmodulin-binding transcription activator 4 isoform A 533 717 - -
Arst3g06010 989 SUPERFAMILY Ankyrin repeat 621 713 IPR036770 -
Arst3g06010 989 ProSiteProfiles IQ motif profile. 770 799 IPR000048 GO:0005515
Arst3g06010 989 Pfam IPT/TIG domain 424 506 IPR002909 -
Arst3g06010 989 ProSiteProfiles IQ motif profile. 850 875 IPR000048 GO:0005515
Arst3g06010 989 FunFam Calmodulin-binding transcription activator 2 826 874 - -
Arst3g06010 989 SUPERFAMILY E set domains 424 507 IPR014756 -
Arst3g06010 989 Coils Coil 946 966 - -
Arst3g06010 989 SMART iq_5 849 871 IPR000048 GO:0005515
Arst3g06010 989 SMART iq_5 826 848 IPR000048 GO:0005515
Arst3g06010 989 SMART iq_5 769 791 IPR000048 GO:0005515
Arst3g06010 989 ProSiteProfiles Ankyrin repeat profile. 652 684 IPR002110 GO:0005515
Arst3g06010 989 Gene3D - 530 716 IPR036770 -
Arst3g06010 989 ProSiteProfiles Ankyrin repeat region circular profile. 652 678 - -
Arst3g06010 989 Pfam IQ calmodulin-binding motif 829 847 IPR000048 GO:0005515
Arst3g06010 989 Pfam IQ calmodulin-binding motif 852 871 IPR000048 GO:0005515
Arst3g06010 989 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 959 - -
Arst3g06010 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 818 873 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06010 Arst-Chr3 133600785 133606202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06010 7 987 CAMTA Transcription Factor Family AT1G67310 50.585 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst3g06010 CG-1 5.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06010 K21596 - gmx:100786880 1456.04