Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g06009 ATGGCAACCGGTGATGATTACAATATTGATGATTTGTTTCAAGAAGCTCAAAGCAGATGGCTGAAGCCTGTGGAAGTGATGTACATTTTACAGAATCATGACAAGTACCAGTTCACACAAGAGCCCCCTCAACAACCAACAAGTGGATCACTTTTTCTCTTTAACAGAAGAGTCCTGCGCTTCTTTCGTAGAGATGGCCATAACTGGCGCAAGAAGAAAGACGGAAGGACTGTCGGAGAGGCACACGAACGCCTTAAGGTTGGAACTGTCGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGATCCGGCATTTGAGCATATTGTTCTTGTGCATTATAGAGAAACAAGTGAGGGAAGGTCCAGCTCTGGACCTGGCACACAATTGTCACCAAGTTCCTCTTCTGCATTTGGCCAGAGTCCTAGCTCATATTCTGCTCAGACACCATTGTCAACATCTGTACTTGGTGATCCATATGAACCTAATCAGAGTTACTCTAGTTCTGGCACCGGAGAAGTTACCTCTGATGTATTCATCATGAATGATGGAATGAGTCACCTGGATGGGACATATGCAGACTCAGGAACTTCAACTGAAGTTGAGGTTACTCGAGCTTTGTTGCGCAGATTGGAGGAGCAGTTAAGTTTGAATGAAGACAGCATCAAAGAAATTGCTTCCTTCTACGGTGAGAAAGAAATTACAGGTGATTCAAATGCTCAACAAAATCAAGGGTTGACCTGTAAGCAAGAGGAATCTGCAGCTTTTGCTAGACCAGATGATTATGGGCTAATTTTTTATGGACATAATGGAACCCAAGATGAAGGTGATAAGTCTTATGAATTAATGGACCATACATACCGTGATGGAAATGAAAAGGATATATGGACAGAGGTGCTGGAATCATGCAAGTCGTCATCCACAGCCAGGTTACCACAGAAAAATGTATACATGCCAGCCGGAAAACAGGAAAATTCACCTTCTTCGTCAAGAAAGGAACCAATTGCCAATCAGGATGATAGTCACTGGCTAAACTTCAACAGTAATAACACAGAAAACTCTGTTTTCTCACTACCTGAAGGTGATAGTGGAGTTGAATATCCCCCATATTCTTCTGTGCTAGAGGCACAAAAAGCTAATTCTGAGTACTATGCAACATTGTTTGCCCAAAGCCAAATTGGACCATCTCTGGATGCAGACTCAAGCTTGACTGTCTCACAAAAACAGAAATTTTCTATTAAGGCAGTCTCCCCAGAATGGGGTTATACCACTGAGACTACTAAGATCATCATTGTTGGGTCTTTTCTGTGTCATCCTTCAGATTCTGCCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCCATTGAGATAATTCAGGACGGTGTAATCAGTTGTGAAGCTCCATCTCGCCTTTCTGGAAAGGTTAATCTCTGCATTACTTCTGGTAATAGGCAGTCCTGCAGTGAAGTCAGAGAGTTTGAGTATCGTAATAAGACAAGTATTTGCACTTACTGTAACTCATCGGCAACAGAAGCCAACAGAAGTCCAGAAGAGCTGCTGTTACTCGTTAGATTTGCACAGATGCTGCTTTCTGGTTCAACTACAAAGAATGATGACATAGAATCTGGAACTCATCTAGTAAAACAGAAAGCCGATGATGATTCATGGAGCCATATTATAGAGGCTCTTCTAGTGGGCAGTGGAACTTCATCTGGTATGGTCGATTGGCTTCTCGAAGAGCTTCTTAAGGATAAGCTGCAGCTGTGGCTTTCTTGCAGGTCCCAGGAGAAAGATGAAGTAACAGGCTGTTGTTTGTCGAAGAAAGAGCAGGGAATCATTCACATGCTAGCTGGATTGGGTTTTGAGTGGGCCTTGCACCCTATTCTCAGTTGTGGTGTGAATATAAATTTCCGTGACATTAACGGATGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGAGAAAAAATGGTTGCTTCACTTATAGCTTGTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCGAAAGGAAAAACTGCTGCATCTATTGCAGCGAGCAGTGGACATAAGGGACTGGCAGGATATCTTTCTGAGAGAGCTCTGACAAGCCATCTGTCATCCCTCACACTGCAAGAGAGTGAGCTATCCAAAAGTTCTGCACAATTCGAAGCAGATTTAGCTGTTAGTAGTGTCTCCAAGGAAAATCTCGCTGCCGGTGAGGATCAGGCTCCACTTAAACATACCTTGGCTGCTGTCAGAAATGCAACTCAGGCCGCAGCACGTATACAATCTGCTTTTCGTTCGCATTCCTTCAGAAAGCGGAGAGCAAGAGAAGCTGCTGCTGCCACTGCTGGTGGTATCAACGCAGGTAGCATTGGTAACATTCCGGAGCTTTCCGCAATGTCAAAACTTGCCTTTCGGAACTCACGGGATCACAATTCTGCTGCCTTATCTATTCAGAAGAAATTTCGAGGTTGGAAGGGTCGCAAAGATTTCTTAGAATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGAAAGCATTACAAGGTGATATGGGCAGTTGGAATCTTGGACAAGGTTGTCCTGCGATGGCGGAGAAAAGGAGCTGGCCTACGAGGTTTCCGACAGGAGATGGAGACCAGTGCCTTGGATGAAAGTGAAGATGAAGATATTCTCAAGCCTTTTCGCAAACAGATGGTAGATGCAGAAATAAAAGAGGCCGTGTCAAGGGTGCTTTCCATGGTTGATTCTCCAGATGCTCGTCAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCTAAGGCTGAACTTGCGGGTACGAGTGAGGAAGCATCATTGTCAACGTCCATTGCGGATGTTTTCAGTATGGAAGATGATATGTATCAGTTTCCTCAGGGCTAA 2973 0.444 MATGDDYNIDDLFQEAQSRWLKPVEVMYILQNHDKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGTVEALNCYYAHGEQNPTFQRRSYWMLDPAFEHIVLVHYRETSEGRSSSGPGTQLSPSSSSAFGQSPSSYSAQTPLSTSVLGDPYEPNQSYSSSGTGEVTSDVFIMNDGMSHLDGTYADSGTSTEVEVTRALLRRLEEQLSLNEDSIKEIASFYGEKEITGDSNAQQNQGLTCKQEESAAFARPDDYGLIFYGHNGTQDEGDKSYELMDHTYRDGNEKDIWTEVLESCKSSSTARLPQKNVYMPAGKQENSPSSSRKEPIANQDDSHWLNFNSNNTENSVFSLPEGDSGVEYPPYSSVLEAQKANSEYYATLFAQSQIGPSLDADSSLTVSQKQKFSIKAVSPEWGYTTETTKIIIVGSFLCHPSDSAWACMFGDVEVPIEIIQDGVISCEAPSRLSGKVNLCITSGNRQSCSEVREFEYRNKTSICTYCNSSATEANRSPEELLLLVRFAQMLLSGSTTKNDDIESGTHLVKQKADDDSWSHIIEALLVGSGTSSGMVDWLLEELLKDKLQLWLSCRSQEKDEVTGCCLSKKEQGIIHMLAGLGFEWALHPILSCGVNINFRDINGWTALHWAARFGREKMVASLIACGASAGAVTDPSAQDPKGKTAASIAASSGHKGLAGYLSERALTSHLSSLTLQESELSKSSAQFEADLAVSSVSKENLAAGEDQAPLKHTLAAVRNATQAAARIQSAFRSHSFRKRRAREAAAATAGGINAGSIGNIPELSAMSKLAFRNSRDHNSAALSIQKKFRGWKGRKDFLELRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRQEMETSALDESEDEDILKPFRKQMVDAEIKEAVSRVLSMVDSPDARQQYHRMLEKYRQAKAELAGTSEEASLSTSIADVFSMEDDMYQFPQG 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g06009 990 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Arst3g06009 990 Gene3D - 531 717 IPR036770 -
Arst3g06009 990 Pfam IQ calmodulin-binding motif 830 848 IPR000048 GO:0005515
Arst3g06009 990 Pfam IQ calmodulin-binding motif 853 872 IPR000048 GO:0005515
Arst3g06009 990 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 960 - -
Arst3g06009 990 SMART CG_1_2 12 130 IPR005559 GO:0003677
Arst3g06009 990 Coils Coil 947 967 - -
Arst3g06009 990 SMART iq_5 850 872 IPR000048 GO:0005515
Arst3g06009 990 SMART iq_5 827 849 IPR000048 GO:0005515
Arst3g06009 990 SMART iq_5 770 792 IPR000048 GO:0005515
Arst3g06009 990 SUPERFAMILY Ankyrin repeat 622 714 IPR036770 -
Arst3g06009 990 Pfam IPT/TIG domain 425 507 IPR002909 -
Arst3g06009 990 Gene3D - 828 876 - -
Arst3g06009 990 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Arst3g06009 990 MobiDBLite consensus disorder prediction 130 185 - -
Arst3g06009 990 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Arst3g06009 990 Pfam Ankyrin repeats (3 copies) 640 714 IPR002110 GO:0005515
Arst3g06009 990 Gene3D Immunoglobulins 417 512 IPR013783 -
Arst3g06009 990 FunFam Calmodulin-binding transcription activator 2 418 511 - -
Arst3g06009 990 ProSiteProfiles Ankyrin repeat region circular profile. 653 679 - -
Arst3g06009 990 ProSiteProfiles IQ motif profile. 771 800 IPR000048 GO:0005515
Arst3g06009 990 ProSiteProfiles IQ motif profile. 851 876 IPR000048 GO:0005515
Arst3g06009 990 ProSiteProfiles Ankyrin repeat profile. 653 685 IPR002110 GO:0005515
Arst3g06009 990 FunFam Calmodulin-binding transcription activator 2 827 875 - -
Arst3g06009 990 SUPERFAMILY E set domains 425 508 IPR014756 -
Arst3g06009 990 CDD IPT 424 508 - -
Arst3g06009 990 FunFam Calmodulin-binding transcription activator 4 isoform A 534 718 - -
Arst3g06009 990 SMART ANK_2a 653 682 IPR002110 GO:0005515
Arst3g06009 990 SMART ANK_2a 692 721 IPR002110 GO:0005515
Arst3g06009 990 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 874 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g06009 Arst-Chr3 133600785 133606222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g06009 7 988 CAMTA Transcription Factor Family AT1G67310 50.049 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst3g06009 CG-1 5.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g06009 K21596 - gmx:100786880 1459.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06009 3 133600785 133606222 Arst3g06009 3 133600785 133606222 ECH